Scomber scombrus (Atlantic mackerel): 133977711
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Entry
133977711 CDS
T10651
Symbol
gpc6a
Name
(RefSeq) glypican-6a
KO
K08112
glypican 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssco00535
]
133977711 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
133977711 (gpc6a)
Proteoglycans [BR:
ssco00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
133977711 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
Others
133977711 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
SpoIVA_C
Put_Phosphatase
Serglycin
Motif
Other DBs
NCBI-GeneID:
133977711
NCBI-ProteinID:
XP_062271953
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Position
1:24037563..24190076
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AA seq
568 aa
AA seq
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MCAMWRLQVALCTLSVLSLSFGGESKARSCSEVRQAYNAKGFSLVNVPHQEISGEHLRVC
PQGYTCCTSEMEDKLNQQSKLEFENLVEDSSHNMRTTFVLRHKKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLLNSQY
HFTEDYLECVSKYTDQLKPFGDIPKKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
VPACVRALTKMLYCPYCRGMPGLKPCHNYCHNVMRGCLANQADLDAEWNFFIDAMLQVAD
RLVGPVNIESVIEPIDIKISEAIMTMQDNSMQVSAKVFQGCGQPKPSGISRSTRGISDVF
SARFRPYTPEERPTTAAGTSLDRLRVVWRTMQQSVIEIKEKLKESKRFWSNLPDDICAKD
KLSESDEEQCWNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDTLIRQQIMALRVMTN
KLKNAYNGNDIYFQDSSDEGSSSGSGSGCSDGCTTEFVFVGTDAPVVGADRSDERAAAAG
KSLFCRPSLLLVMASLTLPLWALQTRWR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgatgtggagactgcaagtcgccttatgtactctgtcggtgctgtccctgtca
tttggtggtgaaagcaaagcgcggagctgcagcgaggttagacaagcatataacgctaaa
ggattcagccttgtcaatgtacctcatcaggaaatatcaggtgagcacctgcgtgtctgt
cctcagggatacacctgctgcacatccgagatggaggacaaactcaaccagcagagcaaa
ctggagtttgagaacttggttgaggatagcagccacaatatgaggacgacatttgtctta
aggcataaaaagtttgacgagtttttcttggagctgctggacaactctgagaagtctctc
aacagcatgttcacacggacgtatgggaagctgtatatgcagaactcagaggttttccag
gacctgttcactgagcttaagcgctactacacagggggcaatgtcaatctggaggagatg
ctgaatgacttctgggccaggctgctggagcgcatgtttcagttactcaactcccagtac
cacttcacagaggactacctggagtgtgtcagtaaatacacagatcagctaaagcccttt
ggagacatacccaagaaactgaaggcccaggtcacaagggccttcattgctgcacggaca
tttgtccaggggctaatggtcggtcgagaagtcgccaacagggtggccaaggtgaatgta
gtaccagcatgtgtcagagccttgaccaagatgctgtactgtccatactgccgcggcatg
cctgggctgaaaccctgtcacaactactgtcacaacgttatgaggggctgtctagcaaac
caggccgacctagatgctgaatggaacttcttcattgatgctatgttgcaggtggctgac
agactggtgggacccgtcaacattgaatcagttatcgagccaatagacatcaagatctca
gaagctataatgaccatgcaggacaacagcatgcaagtgtcagccaaggtttttcaaggg
tgtggccaaccaaaaccttcaggaataagcagatctacacgtggcatatcagatgtgttc
agtgctcgtttcagaccctacacccctgaagaaaggccaaccacagcagccgggacgagc
ctggatagactgagggttgtctggaggacaatgcaacaaagtgtgattgagatcaaagag
aagctgaaggagtccaagaggttctggtccaacctgccagatgacatctgtgccaaggac
aagctctcagagtcggatgaggaacagtgctggaacagccacacgaagggcagatatttc
cctgaagtggtgaaggagggtctaactaaccaggtgaacaacccagaggtggatgtggat
atcaccaggcccgacacactgattcgacagcaaatcatggctctgcgtgtcatgactaac
aagctgaagaatgcttacaatgggaatgacatatactttcaggactccagtgatgaaggc
agtagctctggcagcggcagtggctgctctgacggctgcacaacagagtttgtttttgtt
ggaacagacgctcctgtggtcggagctgacagaagcgatgaacgcgcagcggcagcaggc
aagtcactcttctgcagaccgtccctactgctggtgatggcttccctaacactccctctc
tgggcgttgcagactcgatggagataa
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