Scomber scombrus (Atlantic mackerel): 133977737
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Entry
133977737 CDS
T10651
Symbol
zbtb40
Name
(RefSeq) zinc finger and BTB domain-containing protein 40
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133977737 (zbtb40)
04121 Ubiquitin system [BR:
ssco04121
]
133977737 (zbtb40)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
133977737 (zbtb40)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
133977737 (zbtb40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-Di19
zf-C2H2_6
BTB_KLHL33
zf-MYST
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2H2_15
zf-met
Zf-C2H2_ZNF451
zf-C2H2_11
POP1_N
zf-C2H2_OTU1_C
Motif
Other DBs
NCBI-GeneID:
133977737
NCBI-ProteinID:
XP_062271983
LinkDB
All DBs
Position
3:2216761..2228799
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AA seq
873 aa
AA seq
DB search
MMELPNYSSQLMQQLWALRKEGQFCDCTILVGDSPHRAHKLVLAASSMLFRSLLDGSDTI
SIDTAVVSSQEFGCLLDMVYTGKLPLGKHNVSRIVAAADSLQMFDVAVGFKNVLTSLVNQ
QPPAPASSTETETETPTPTLVNKLPNAKPEGSDSPNKDESSSGETESKAKPKKEECQPDS
KDTEEPSFKRVCLERSESPGPEEAAPSDSVTEEDNKTAAKVSNGPACGLLEHSSQLIELL
SDMPSVVELLSQAAQSSLDEQERQLVCECCEDSDSSSVMEKLMSRVKEGQISEGAFLRLL
HTVQKKAPSTFPTPLLSLLEVEEEEEEERNTQEPDEGQTEADSEQQNGNSSDDKQEEERE
EENIKEETEEDEKEANAATDDSSPPPSSPSSPTNPYSCRWCKKGFAYKCRMVAHAKRCSM
SKECQQQCPLCPEKLANQRALQRHRAEAHRNTTRVKKKVACDLCGRTFAHPSGMIYHKRT
EHFEEKPFACEECGAKFGANSSLKNHMRLHTGEKPYHCKHCDMSFSVAAALAYHTKKKHS
EGKMYVCQYCKAVFAQSIELTRHVRTHTGDRPYVCRECGKGYSQASGLTVHLHTFHNLSE
PHDCQKCCLSFSTLEEHRQHIEEFHPKEFHKCPTCNKVFTSAALLDKHKATHTGSKPFSC
DLCNKSYQQLSGLWYHNRTNHPDVFANHTRQLKTLVQCDVCFKFFPSAASVAKHQAAEHQ
GSAASTVRCPYCPAVLGGEEEMQEHISTQHVSQSSEVFSCPLCSLVCTSQIELQEHLLSC
HMEAQDEQEAGEEQEQASTSHTVISTDAAGDEGVESGISEEQSQLAATQQVFVTLAGGRE
GSSAGEVVEVNMYDLLNSSVTFICEDKQTGPDS
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctacctaactacagtagccagctgatgcagcagctgtgggccctgaggaag
gagggccagttctgtgactgcaccatcctggtgggagatagtcctcatcgagcacataaa
ctggtgctggctgcatccagcatgctgttcaggtctctcctggatggttctgacaccatc
tccatcgacacagctgtggtgtcctcgcaggagttcggctgtctgctggacatggtctac
acaggaaagcttcctctgggcaaacacaacgtcagccgcatcgtggccgccgcagacagc
ctgcaaatgttcgacgtggcggtcggctttaaaaacgtcctcactagcctcgtgaaccag
cagcctccggccccggcctcctctacggagacggagacagagaccccgacccccaccctg
gtcaacaaactcccaaacgctaaacctgaaggttcagactcacccaacaaggatgagtcc
agttcaggtgagactgagtcgaaggctaagccgaagaaggaagaatgtcagcctgacagt
aaagacacagaggaaccatcgtttaaaagagtctgtctggagcgctctgagtccccagga
cctgaagaagctgcaccctcagatagcgttacagaggaagataataaaacagcagccaag
gtgtccaatggtccagcctgtggtcttctggaacattcctctcagctgatagagctcctc
agtgacatgccttcagtggtggagctgctgagccaggcagcacagagcagcctggatgaa
caggagagacagcttgtgtgtgagtgctgtgaggactcagattccagctcggtgatggag
aagctgatgagcagagtgaaggaggggcagatcagtgaaggagcgttcctcaggctgctt
cacactgtccaaaagaaagcgccctccacctttcccacaccactgctctctctgctggag
gtggaggaggaggaggaggaggagaggaacacgcaggagccagacgaaggccagactgaa
gctgactcagaacagcagaacgggaacagcagcgatgacaagcaagaggaagagagagag
gaagagaacatcaaggaggagaccgaagaggacgagaaagaagcgaacgcggccaccgac
gattcctcgcctcccccttcctccccttcctcccccaccaatccctactcttgtcgctgg
tgtaagaagggtttcgcctacaagtgtcgcatggtggcccacgccaagcgctgctccatg
tccaaggagtgccagcaacagtgtccgctgtgccccgagaagctggccaaccagagggct
ctgcagcgccaccgggccgaggctcaccgcaacaccacgcgggtcaagaagaaggtggcg
tgtgacctgtgtggacgcaccttcgcccatccttcaggtatgatttaccacaagcgcact
gagcactttgaagagaagccgtttgcttgcgaggaatgcggtgccaagtttggagccaac
tcatctctgaagaatcacatgcggcttcacacaggagagaaaccctaccactgcaaacac
tgtgacatgagctttagtgtggctgctgcactcgcttaccacaccaagaagaaacactct
gaggggaagatgtatgtgtgtcagtactgcaaagcagtcttcgcccagtccattgaactg
acgcgccacgtgcgaacacacactggtgatcggccgtatgtgtgtcgggaatgtgggaaa
ggctacagccaggccagcggactgactgtacacttgcacaccttccacaacctgtcagaa
cctcatgactgtcagaagtgctgtctgagcttctctacactggaggagcatcggcagcac
atcgaagagttccacccgaaggagttccacaagtgtcccacctgcaacaaggtgttcacc
agcgccgccctgctggacaaacacaaggccacacacacaggaagcaagcccttcagctgt
gacctgtgcaataagtcttatcagcaactgtcgggtttgtggtaccataacaggaccaac
caccccgatgtgtttgctaaccacacccggcagctgaagactctggttcagtgtgacgtc
tgcttcaagttcttccccagtgccgccagtgtggccaaacaccaggcagctgagcaccaa
ggctcggcggcgtctacggtgcgttgtccgtactgtccagctgtgttgggtggagaggag
gagatgcaggagcacatcagcacccagcacgtgagccagagcagcgaggtgttcagctgc
ccactctgctccctggtctgcacgtcccagatagagctgcaggagcacctgctctcctgc
cacatggaggcacaggacgaacaggaggctggggaggagcaggagcaggcctccacctcc
cacacggtgatctcaacagatgctgcaggtgatgagggggtggagtcaggcatctctgag
gagcagtcacagctggcggctacacagcaggtgtttgtgactctggcaggtggaagagag
ggcagctcagcgggggaggtggtggaggtcaacatgtacgacctgctgaacagctccgtc
accttcatctgcgaggacaaacaaacaggtcctgactcttaa
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