Scomber scombrus (Atlantic mackerel): 133977742
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Entry
133977742 CDS
T10651
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssco04030
]
133977742
G protein-coupled receptors [BR:
ssco04030
]
Rhodopsin family
Vision
Opsin
133977742
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
MpPF26
TctB
Motif
Other DBs
NCBI-GeneID:
133977742
NCBI-ProteinID:
XP_062271987
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Position
3:10425000..10427166
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AA seq
357 aa
AA seq
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MTEEWGKPAFAARRHYEDSTRGSAFVYTNSNQTRDPFEGPNYHIAPRWIYNLSTVWMMIV
VVLSVFTNGLVLVATAKFKKLRHPLNWILVNLAVADLGETVFASTISVCNQYFGYFILGH
PMCVFEGYTVSVCGIAALWSLTIISWERWVVVCKPFGNVKFDAKWATGGIVFSWVWSAVW
CAPPIFGWSRYWPHGLKTSCGPDVFSGSEDSGVQSYMIVLMITCCLIPLAIIILCYLAVW
LAIRAVALQQKESESTQKAEKEVSRMVVVMILAYCLCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPIIYVFMNRQFRTCIMQLFGKEVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagagtggggaaaaccggcgtttgccgccaggcgacactatgaagactcaaca
aggggatctgcctttgtttacacaaacagcaatcaaacaagagatccctttgaaggtcca
aattaccacattgctcctcgatggatttacaacctttcaacagtctggatgatgattgtg
gttgttctatcagtcttcactaacggtctcgtcttggtggcaacagcaaagttcaagaaa
ctccgtcaccctctgaactggatcttggtcaatcttgctgttgctgatcttggagagaca
gtatttgcaagcacaatcagtgtatgcaaccagtattttggttacttcattctaggacac
ccaatgtgcgtctttgagggctacactgtctcagtttgtggcattgctgctctctggtcc
ctgactatcatctcttgggagagatgggtcgttgtctgcaaaccttttggaaacgtcaag
tttgatgccaaatgggccacaggtggaattgtattttcctgggtctggtcagctgtatgg
tgtgctccccccatatttggatggagcaggtactggcctcacggactgaagacttcctgt
ggacctgatgtattcagtggaagtgaggactctggtgtccagtcctatatgattgttctt
atgattacatgttgcttaattccccttgctatcatcatcctttgctacctggcggtctgg
ttggctatccgtgctgttgccttgcagcaaaaggaatcagagtcaacccagaaagctgag
aaagaagtatccagaatggtcgttgtcatgattttggcatactgtttatgttggggacct
tacaccttttttgcctgctttgctgcggcaaaccctggatatgctttccatcctctggct
gctgccatgcctgcatactttgccaagagcgccaccatctacaacccaattatctatgtc
ttcatgaaccgccagttccgcacatgcatcatgcagctttttggcaaagaagttgatgat
ggctctgaagtatctacatcaaagacagaggtctcgtctgtggctcctgcataa
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