Scomber scombrus (Atlantic mackerel): 133977748
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Entry
133977748 CDS
T10651
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssco01100
Metabolic pathways
Module
ssco_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
133977748 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
133977748 (chsy1)
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
133977748 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
133977748 (chsy1)
Glycosyltransferases [BR:
ssco01003
]
Glycan extension
O-Glycan
133977748 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
133977748
NCBI-ProteinID:
XP_062272001
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All DBs
Position
1:complement(2972246..3032892)
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AA seq
799 aa
AA seq
DB search
MAGRSRRAWFSVLLGLVVGFTLASRLILPKATELKKAGQKRKANPAGCGLNGVLRKEYGG
VLWPPQNNGLPATEKPGSRSNHFLFVGVMTAQKYLNSRAVAAHRTWAQTIPGHVEFFSSE
GSDTSIPIPIMALRNVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKSGKLES
FLRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLKRMVPHIRECL
QEMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAITL
HPNKNPPYQYRLHSYMLSRKIADLRHRTIQLHREIVQMGRYGAAEPSREDLQLGMPPSFM
RFHPRQREEVLEWEFLTGKYLFSSSDGQPPRRGMDSSQRQALDDIIMQVMEMINANAKTR
GRVIDFKEIQYGYRRVNPLYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSQIQFK
EEEEMDARALASHINKESDSLSFLSNSLKMLVPFKLATSGQEQREPKEKKVNILVPLSGR
YDIFVRFMANFERVCLMPNQNVKLLILLFSTDNNTERVKQVELMREYHMKYPRAEMEIKP
VAGSFSRALALEVGSAHFTNDSLLFYCDVDLLFTSEFLKRCRANTALGAQTYFPIIFSQY
DPKVVYAGKVPSNNHYVFTSKTGLWRNYGFGIVCVYKGDLVRAGGFDTSIQGWGLEDVDL
FNKFVQSGVKLFRSTDTGIVHVHHPVICDPNLEAKQYKMCLGSKASSHGSTQQLAELWLE
KNDHGFGRLASNNGSVRTA
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaagccgaagagcatggtttagtgttctgctgggactggtggtcggtttc
acactggcttccaggctaattttacccaaggcgaccgagttgaagaaagctggtcaaaaa
cgaaaagcaaaccctgccggttgtgggttgaacggagttctccgaaaggagtacggcgga
gtattatggccgccgcaaaataacggtttaccggcgaccgagaaacctggttccaggtcc
aatcatttcctgttcgttggtgtcatgactgcccagaagtatctgaacagccgagcagtg
gcggcgcacaggacatgggcacagacaattccaggccatgttgagttcttctccagtgaa
ggctctgacacctccatacccattcccataatggctctgaggaatgtggatgactcgtat
ccaccacagaagaagtccttcatgatgctcaaatacatgcatgaccactacctggacaag
tatgagtggttcatgagggcggatgacgacgtctacatcaagagcgggaagcttgagagt
ttcctgcgcagccttaatagcagcgaggccatcttcctgggtcaaacgggcatgggggcc
cgggacgagctggggaaactggccttagagcctggggagaacttctgcatgggggggcca
ggggtcatcatgagccgtgaggtcctcaagagaatggtgcctcacatccgagagtgtcta
caggagatgtacaccactcatgaggatgttgaggttggccggtgtgtcaggaggtttgcg
ggagtccagtgtgtctggtcgtatgagatgcagcagcttttctatgagaactatgaacca
aataagaagggctacatacgagatctccacaatagcaagatccatcgagccatcaccctc
caccccaacaagaaccctccctaccagtatcgcctacacagctacatgctcagccgcaag
attgcagacctacgccaccgaaccattcagcttcaccgggagatcgtccagatggggcgc
tatggagcagccgagcctagccgagaagacctccagcttggcatgccaccctcatttatg
cgcttccacccacggcagagagaggaggtcctggagtgggagttccttacaggcaaatac
ctgttctcatcgtctgacgggcagccgccccgccgtgggatggattcttcccagaggcaa
gccttggatgacatcatcatgcaggtgatggagatgatcaacgccaatgcaaagacacgg
gggcgggtcattgatttcaaagaaattcagtatggctaccgaagggtcaatcctttatat
ggggcagagtatgtgctggatctgttgttgctctacaagaagcacaaaggtaagacaatg
acagtacctgtgaggaggcatgcttacctgcagcagaccttcagccagatccagttcaaa
gaggaggaggagatggatgccagagccctggccagccacatcaacaaagagtcggactcc
ctttcattcttgtctaactccctcaagatgctggtgccattcaaacttgccacatctggc
caggaacagagggaaccaaaagagaagaaagtcaacatcttggtacctctgtcaggacga
tatgacatctttgtgcgcttcatggccaactttgaaagagtttgtctgatgcccaaccag
aatgtcaaattgctgatcctgctcttcagtacagacaacaacactgagcgggttaagcag
gtggagctgatgagggagtatcacatgaaatatccccgggctgagatggagataaagccc
gtcgctggctccttctccagggctctggctttagaagtgggctcggcacatttcactaat
gattcactgctcttctactgtgatgtggacctgctcttcaccagcgaattcctcaagcgc
tgccgggccaataccgcccttggggcacagacctacttccccatcatcttcagccagtac
gacccaaaggtggtgtatgctgggaaggtccccagcaacaaccactacgtcttcacctcc
aagacaggcctgtggaggaactacggttttgggatcgtctgtgtctacaaaggggacttg
gttagagctggaggctttgacacctccatacaggggtggggattggaggatgtggacctc
tttaataaatttgtccagtcaggggttaagttgttcagaagcacagacacagggatagtg
catgtccaccacccagtcatatgtgatcccaacctggaggcaaagcaatataagatgtgc
ctgggctccaaagcctcgtcgcacggctccacccaacagctggccgagctctggctggag
aagaatgaccacggcttcgggagactggccagcaataacggctcagttaggacagcgtga
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