Scomber scombrus (Atlantic mackerel): 133977860
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Entry
133977860 CDS
T10651
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133977860
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
133977860
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF5365
Motif
Other DBs
NCBI-GeneID:
133977860
NCBI-ProteinID:
XP_062272141
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Position
3:15732858..15736904
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AA seq
428 aa
AA seq
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MERIPSAQPPPLSKHQADLSDVQGMDFPMYVYKPRRGMKRGEESKETYKLPHRLIEKKRR
DRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSSLLEQQQQKILALQNGM
QIEQPPVSQEKSEEMFRSGFHMCAKEILQYLTCHETEGDFTPSHVINHLHKLAAEVLQSP
VRPRTPLSPPPEEIPAYHQRQPHKEMPASLPPKPSEGYGRNCVPVIQRAYAPQSGEQSGS
DTDTDSGYGGELEKNESGVLQRRPDYYSQESQLKRALDERQGPRIKQEDDEPRHKRPRVE
SSEDEVLSGGESSTSPSSSGYGSYMSVSPNHPPPPHPLCMPFYLIPPSAAAYLPMLEKCW
YPGAVPMLYPSMGSTAPAMSSERPPPPQLVLSPRGGSPAPAISQTPMDSPALLQALKQVP
PLNLETKD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaatcccaagcgcgcagccacctcctctgtccaaacaccaggctgatctgtca
gacgtgcaggggatggatttcccgatgtatgtttataaacccaggcgaggaatgaagaga
ggagaagagagcaaggaaacctacaagctgcctcacagacttattgaaaagaaaaggcgt
gaccggataaacgagtgcatcgcccagctgaaagatttactgccagagcacctgaaactc
acgactcttggccatctggagaaggctgtggttttagagcttacgctcaagcatgtgaaa
gccctctcctctcttctggagcaacagcagcagaagatcctcgctctgcagaacggcatg
caaattgagcagcctcctgtcagtcaggagaagtcagaagagatgttccgctctggcttc
cacatgtgtgccaaggagatccttcaatatctaacctgtcatgagactgaaggagacttc
acaccatcccacgtgatcaatcaccttcacaagttagctgcagaggtgctgcaaagtccg
gtcagaccccgcactcctctcagccctccacctgaggaaattcctgcctaccaccagcgc
caacctcacaaggaaatgcccgccagcttaccccctaaacccagtgagggctatggtagg
aactgtgtgcctgtcattcagcgggcgtatgctccacagagtggcgagcagagtggcagt
gatacggatacagacagcggctatgggggagagttggagaagaatgagtcaggggtgttg
cagcgacgaccagattactacagtcaggagagccagctaaagcgagcactcgatgagagg
cagggccccagaatcaagcaggaggacgatgagccacgccacaaacgaccccgggtggag
tcatctgaggatgaggtgctctcaggtggagagtcatccacttcaccatcctcaagtggt
tacggtagttacatgagtgtatcccccaaccatccacctcctccacatcccctatgcatg
cctttctacctcattccaccctctgctgccgcctacctgccaatgctggagaaatgctgg
tacccaggagctgtccctatgttgtaccccagcatgggaagcaccgcgcctgccatgtcc
agtgaaagaccgccaccacctcagctcgtgttgtctcccaggggaggctctccagctcca
gccatatctcaaacccctatggactcccctgccctccttcaggcactaaaacaggtacca
cccctcaacctggaaaccaaagactga
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