Scomber scombrus (Atlantic mackerel): 133977863
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Entry
133977863 CDS
T10651
Symbol
itgb6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04510
Focal adhesion
ssco04512
ECM-receptor interaction
ssco04810
Regulation of actin cytoskeleton
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133977863 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133977863 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133977863 (itgb6)
04810 Regulation of actin cytoskeleton
133977863 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133977863 (itgb6)
04515 Cell adhesion molecules [BR:
ssco04515
]
133977863 (itgb6)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
133977863 (itgb6)
Cell adhesion molecules [BR:
ssco04515
]
Integrins
Integrin beta subunits
133977863 (itgb6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
133977863
NCBI-ProteinID:
XP_062272147
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All DBs
Position
1:complement(26503861..26512630)
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AA seq
649 aa
AA seq
DB search
MDLSASMIDDLEKIKDLGSSLSKEMAKLTSKFRMGFGSFVEKPVLPFIKITEDELANPCS
GVGSTCLPTFGYKHVLSLTSSTDKFNEIIAKQLVSANIDLPECGFDAVMQAAVCGDKIGW
RNDSMRLLVFVSDADSHFGMDSKMAGIVIPNDGQCHLDINNEYSMSTVQEYPTLGQLIDK
VVENNILLIFAVTEQQKLNYKNYANLIPGATVGVLASDSRNILELIVTAYKELRSEIELE
VLGDTEDFQMSFTAICPDGTVFPDLKRCSNIKPGETVVFNVTVELSGCLYGVRHFSLKPV
GLQDSLEVELESLCSCDCQQPPEANSSLCTEGQGAFQCGVCVCQPGFLGAECECNEESVL
LSNCLANNESQLCSGQGQCYCGECVCDASSFGRIYGPYCECDNYSCVRFRGELCGGHGVC
DCGDCHCQSGWTGEYCNCSTSTESCMSEDGALCSGRGKCECGHCVCSVPGASGDKCEKCP
TCGDACSLARTCVECHVQEKDDAELCDQRCSVPKIYINTTADYDDKRPSVQCTLMMENEC
RISFSVVGSDTGTTAYDLQMNGCPDPPNILMIILGVSLSVVCIGLILLAVWKVLVSVHDR
KEVAKFEAERSKAKWQSGTNPLFRSSTSTFKNVTYKNRDKEKIITMNHY
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggacctgtcagcatccatgattgatgatctggagaagatcaaggacctgggttcctct
ctgtctaaagagatggccaaactgaccagtaaatttcgcatgggcttcggctcttttgtg
gagaaacctgtcctgccctttatcaagatcacagaggatgaactcgccaacccctgcagt
ggtgtaggctcgacctgtctgccaacgtttggctataaacatgtcttgtctctgacgagc
agcactgacaagttcaacgagataatcgcaaagcagcttgtgtctgcaaacattgacctg
ccagagtgtggctttgatgctgtcatgcaggcggccgtttgtggggacaagataggctgg
aggaatgattcgatgcgtctgctggtgtttgtcagtgatgctgactcacactttgggatg
gacagtaaaatggccggcattgtgattcccaacgatggacagtgtcacctggacatcaac
aacgaatactccatgtccacagtgcaggagtatccaactcttggccagctgattgataag
gttgtggagaacaatatcttactgatatttgctgtgacagaacagcagaaactcaactat
aagaactatgcaaatctcatacctggcgccacagttggagtcctggcatcagattcgcgg
aacatcttggaactgattgtgacagcgtacaaagaattgcgttcagagattgaactggag
gtccttggagacacagaggatttccagatgtccttcacagccatttgcccagatgggaca
gtcttccctgacctaaaacgctgctccaacatcaaacctggagagacggtggtgttcaat
gtgactgtggagctctcgggatgcctgtatggagttcggcacttctccctcaaaccagtg
ggtttacaggacagtttggaggttgaactggagtctctttgctcctgtgattgccagcag
cctcctgaagcaaacagcagcctctgcaccgagggccaaggggctttccagtgtggcgtg
tgcgtgtgtcagccaggcttcttgggagcggagtgtgaatgcaacgaggaaagtgttttg
ttgagtaactgccttgcaaacaatgagtcccagttatgcagtggtcaggggcaatgctac
tgtggagagtgtgtgtgtgatgcatccagttttggccgcatctacggaccttactgcgag
tgtgacaactattcctgtgtccgcttccgtggggagctgtgtggaggccatggagtgtgt
gactgcggagactgtcactgccaaagtggctggacaggggagtattgtaactgcagtacc
agcactgagtcgtgcatgtcagaggatggtgccctctgcagcgggcgggggaagtgtgag
tgtggccattgtgtctgctctgttcccggagcatctggggacaagtgtgagaagtgccca
acatgtggagatgcctgtagcttggcaaggacttgtgtagagtgccacgtccaagaaaag
gatgatgcagagctgtgtgatcaaagatgcagcgtccctaaaatctacatcaacacaaca
gcagattatgacgacaagaggccttcagtgcaatgcacgctgatgatggagaatgagtgc
cggatctcatttagcgtggtaggaagtgacacagggaccactgcctatgacctccagatg
aatggttgtcctgatcctccaaacatcctcatgattattctgggggtgtccctctccgtc
gtgtgtatcggcctgatcctgctggctgtgtggaaggtgctggtgtcggttcatgaccgc
aaagaggtggccaagtttgaggctgagaggtcaaaggcaaagtggcagtcggggaccaac
cctctgttcagaagctcaacgtctacatttaaaaatgtaacttataaaaacagagataaa
gaaaagattattacaatgaatcactactga
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