Scomber scombrus (Atlantic mackerel): 133977892
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Entry
133977892 CDS
T10651
Symbol
dcaf12
Name
(RefSeq) DDB1- and CUL4-associated factor 12
KO
K11803
DDB1- and CUL4-associated factor 12
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133977892 (dcaf12)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133977892 (dcaf12)
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF12
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
WD40_like
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
133977892
NCBI-ProteinID:
XP_062272176
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All DBs
Position
3:11339165..11348250
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AA seq
483 aa
AA seq
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MARKTVSRKRKAGEPKDQQQLGWCQAPHKRSRVSCSSRHAQQWWCSRRSVVCALRGREFR
PQQQHELRLQRSLRGFAAGRLPGILKEREFSLGRLNKVFASQWLNHRQVVCGTKCNTLFV
ADVLTGQITRIPMLKDRECSGGGSGVVDAVVPGQHYHPTGGSRSRLDQQGCGIHAIELNP
SRTLLATGGDNPNSLAIYQLPTLDPVCVGDDGHNDWIFSIAWISDNMAVSGSRDGSMGLW
EVTEDVMSQAEQSQSEQAVPSYAHISHRALKDIPKEFTNPYNCKVRALAFNNNHKELGAV
SLDGYFHLWKAEHNLCKLLSTKLPHCKENVCLAYGQDWSVYAVGSQAHVSFLDPRQPTHS
IKSVNSRERGSGIRSVSFYEHIVTVGTGQGSLLFYDIRAQRFLENPLNPAGGYRKCPGDG
ILKLTTGKGWLNHDETWRSYFSDIHSFPNAVYTHCYDDSGTKLFVAGGPLCSGLHGNYAG
LWS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaaaacagttagcaggaaaaggaaggcaggagagcccaaggaccaacaacag
ctgggctggtgtcaggccccacacaagcggagccgtgtttcttgttcatcacgtcatgcc
cagcagtggtggtgcagtcggcgctcagtggtgtgtgccctccgagggcgggagtttaga
cctcaacagcagcatgagttacggctccagcggagcctacggggctttgctgccggcagg
ctccctgggatcctcaaggagagggagttctctctggggcgacttaacaaggtgtttgct
tcacaatggctgaaccaccggcaggtggtgtgtgggaccaagtgcaacacgctttttgta
gccgatgtcctgactgggcagataacacgcattcccatgctgaaggacagggagtgtagt
ggtggaggctctggggtggtggatgcagtggtgccggggcagcattaccaccccacagga
ggctcccgttcccggctggaccagcagggctgcgggatccacgctattgagctcaacccc
tctagaacactgctcgccacaggaggagacaatcccaacagcctggccatctaccagctg
cctacactggaccctgtttgtgtcggagatgatggccacaatgactggatcttctccata
gcgtggatcagtgacaatatggcagtttcagggtccagagatggctccatgggcctgtgg
gaggtgacggaggacgtgatgagtcaggcagagcagagtcagagtgagcaggcagtgccc
tcctacgcccacatctcccaccgtgccctaaaggacattcccaaggagttcaccaaccca
tacaactgcaaagtccgtgctctggccttcaataacaaccataaagagctgggtgctgtg
tcattggatggctatttccacctctggaaagctgagcataacttgtgcaagctgctgtcc
accaagctgcctcactgcaaagagaatgtgtgtctggcgtatggacaggactggtcagtg
tacgctgttggttctcaggcccacgtctcttttctggatccacggcagcctacacacagc
ataaagtctgtcaattccagagagagaggaagcgggatccgttcagtaagtttctatgaa
cacattgtgacagtgggtaccggccaaggttccctccttttctatgacatccgggcccag
agattcttggagaaccctttgaatccagccggggggtaccgaaagtgcccaggagatggc
atcctcaagctcactacagggaaaggctggctgaatcatgatgagacgtggaggagttac
ttctcagacattcattccttccccaacgcagtgtacacccactgctatgacgactccggc
accaagctgtttgtagcaggtggaccactctgttctggcctgcacggcaactacgcagga
ctgtggagctag
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