Scomber scombrus (Atlantic mackerel): 133977901
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Entry
133977901 CDS
T10651
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133977901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133977901
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
133977901
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GFIT
Motif
Pfam:
HLH
Hairy_orange
CHAD
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
133977901
NCBI-ProteinID:
XP_062272184
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Position
3:complement(28087411..28088078)
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AA seq
185 aa
AA seq
DB search
MQPAEIRFSLQRPLQHRDPAMAPTITAAMTNSQEHQTLTHKLRKPLVEKLRRDRINSSIE
QLKSLLGPEFIKQQPDSKMEKADILEMTVCLLTQLQHQQQQQHPAVESAAVDQGYSRCVR
EVSHFLCKEEVKTQSQKRLLNHFNKLQSSSDKKQRDADFSPLSSTVQTSITKEKSPVNSA
LWRPW
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagcagagatcagattctctctacagagacctctacagcacagagatccagct
atggcacctacaatcactgcagcaatgaccaactctcaggagcatcagactctgacccac
aagctcagaaagcctctggtggagaagttacgcagagatcgaatcaacagcagcattgag
cagctcaagtctctcctgggtccagagttcatcaaacagcagccagactccaagatggag
aaagcagacatcctggagatgacagtttgcctcctgacacagctgcagcaccagcagcag
cagcagcatccagctgttgagtcagcagctgtggatcaaggctactccaggtgtgtccga
gaggtgtcgcacttcctgtgcaaagaggaggtgaagacacagtcccagaaaagactgctg
aaccacttcaacaagctgcagtcttcctctgacaagaaacagagagatgctgacttctct
cctctgagctccacagtccagaccagcatcactaaagagaagagtccagtcaacagcgcc
ctctggaggccgtggtag
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integrated database retrieval system
