Scomber scombrus (Atlantic mackerel): 133977930
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Entry
133977930 CDS
T10651
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133977930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133977930
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
133977930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
Androgen_recep
TFIIA
INTS7_C_plants
DUF5349
CHAD
TMEM51
Motif
Other DBs
NCBI-GeneID:
133977930
NCBI-ProteinID:
XP_062272214
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Position
3:complement(28091386..28092104)
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AA seq
202 aa
AA seq
DB search
MQPAEIRFSLQRPLQHRDPAMAPTITAAMTNSQEHLTLTHKLRKPQVEKLRRDRINSSIE
QLKSLLGPKFLKQQPDSKMEKADILEMTVCLLTQQQQQQQQQQQQQQQQQQQQQQQQQQH
PAVESAAVDQGYSRCVREVAHFLSKEEVKTQSQKRLLNHFNKLQSSSDKNLRQADFSPLS
STVQTSITKEKSPVNSALWRPW
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagcagagatcagattctctctacagagacctctacagcacagagatccagct
atggcacctacaatcactgcagcaatgaccaactctcaggagcatctgactctgacccac
aagctcagaaagcctcaggtggagaagttacgcagagatcgaatcaacagcagcattgag
cagctcaagtctctcctgggtccaaagttcctcaaacagcagccagactccaagatggag
aaagcagacatcctggagatgacagtttgcctcctgacacagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcat
ccagctgttgagtcagcagctgtggatcaaggctactccaggtgtgtccgagaggtggca
cacttcctgagcaaagaggaggtgaagacacagtcccagaaaagactgctgaaccacttc
aacaagctgcagtcttcctctgacaagaacctgagacaggctgacttctctcctctgagc
tccacagtccagaccagcatcactaaagagaagagtccagtcaacagcgccctctggagg
ccgtggtag
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integrated database retrieval system
