| Entry |
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| Symbol |
smarcd1
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| Name |
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
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| KO |
| K11650 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D |
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| Organism |
ssco Scomber scombrus (Atlantic mackerel)
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| Pathway |
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| Brite |
Transcription machinery [BR:ssco03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133977939 (smarcd1)
Chromosome and associated proteins [BR:ssco03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133977939 (smarcd1)
PBAF complex
133977939 (smarcd1)
GBAF(ncBAF) complex
133977939 (smarcd1)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
3:24675562..24693333
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| AA seq |
514 aa
MAARGGFQSAPTGGGVGAMGPGPPVPGAGPGMGPGTPSGRMGPSSAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGNSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT |
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| NT seq |
1545 nt +upstreamnt +downstreamnt
atggcggccagaggggggtttcagtcagcaccaactggaggtggtgtcggagcaatggga
cctggacctccggtaccgggtgcaggaccgggcatgggacctgggactccctctggaagg
atgggaccgtcttcggcggcgcagaaccatatgtaccgctccccgatgcccgggcccggt
tacccgagaccgggcatgcctccatccagccgtatgaccccgcagggaccggccatggga
cccccaggatatggtaatagccctgtgtctcgccccgggatgcctggcgtgatggacccg
tctcgcaagaggcccgcaccccaacagattcagcaggttcagcagcagaaccgcaaccag
cacacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactggtc
ccagagtctcaggcttacatggatctactggcttttgagaggaagctggaccagaccatc
atgcgcaagaggttggacattcaggaggctcttaagaggcccattaagcaaaagagaaag
ctccggatcttcatatccaacaccttcaaccctgcaaagcctgacgccgaggacggagag
ggcacagtggcatcgtgggagctgcgtgttgaggggcgtctgcttgaagatacggccgtg
tccaagtatgaagccactaaacagaagaggaagttctcctctttcttcaagtccctggtg
attgagttggacaaggacctgtacggtccagataatcaccttgtggaatggcataggacc
gccaccacccaggagactgatggtttccaggtgaagaggccaggtgacgtgggtgtccgc
tgcaccgtcctgctcatgctggactaccagccccctcagttcaagctggacccccggctg
gctcgtatgctgggcatccacacccagacaagacctgtcatcatccaggctctgtggcag
tacgtcaagactcacaagctccaagacccccatgagcgcgagttcatcaactgtgacaaa
tacctgcagcagatctttgagacccagcgaatgaagttctctgagatcccgcagcgcctg
catgcactcctaatgcctccagagcccatcatcatcaaccatgtgatcagcgtggatcct
aatgaccaaaagaagactgcttgctatgacattgacgtggaggtggacgacacactgaag
acccagatgaactccttcctgctctccacagccagtcagcaggaaatagccgggctagac
aacaagatccatgaaaccattgagaccattaaccagctgaagacccagagagagtttatg
ctgagttttgccagagatcctcagggctttatcaatgactggctgcagtcccagtgcaga
gacctcaagaccatgacagatgtggttgcaaacccagaagaagagcgaagagccgagttc
tactaccagccgtgggcccaggaagcagtctgtcgctacttctactccaaggtccagcag
agacgacaggagctggagcaggcgctcggcatcaggaacacctaa |
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