Scomber scombrus (Atlantic mackerel): 133977962
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Entry
133977962 CDS
T10651
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133977962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133977962
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
133977962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Hairy_orange
CHAD
Motif
Other DBs
NCBI-GeneID:
133977962
NCBI-ProteinID:
XP_062272251
LinkDB
All DBs
Position
3:complement(28059858..28060525)
Genome browser
AA seq
185 aa
AA seq
DB search
MQPAEIRFSLQRPLQHRDPAMAPTITAAMTKSQEHQTLTHKLRKPQVEKLRRDRINSSIE
QLKSILGPKFLKQQPDSKMEKADILEMTVCLLTQLQHQQQQQHPAVESAAVDQGYSRCVR
EVAHFLCKEEVKTQSQKRLLNHFNKLQSSSDKNLRDADFSPLSSTVQTSITKEKSPVNSA
LWRPW
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagcagagatcagattctctctacagagacctctacagcacagagatccagct
atggcacctacaatcactgcagcaatgaccaaatctcaggagcatcagactctgacccac
aagctcagaaagcctcaggtggagaagttacgcagagatcgaatcaacagcagcattgag
cagctcaagtctatcctgggtccaaagttcctcaaacagcagccagactccaagatggag
aaagcagacatcctggagatgacagtttgcctcctgacacagctgcagcaccagcagcag
cagcagcatccagctgttgagtcagcagctgtggatcaaggctactccaggtgtgtccga
gaggtggcgcacttcctgtgcaaagaggaggtgaagacacagtcccagaaaagactgctg
aaccacttcaacaagctgcagtcttcctctgacaagaacctgagagatgctgacttctct
cctctgagctccacagtccagaccagcatcactaaagagaagagtccagtcaacagcgcc
ctctggaggccgtggtag
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integrated database retrieval system
