Scomber scombrus (Atlantic mackerel): 133977987
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Entry
133977987 CDS
T10651
Symbol
slc12a1
Name
(RefSeq) solute carrier family 12 member 1 isoform X1
KO
K14425
solute carrier family 12 (sodium/potassium/chloride transporter), member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133977987 (slc12a1)
04147 Exosome [BR:
ssco04147
]
133977987 (slc12a1)
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
133977987 (slc12a1)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133977987 (slc12a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLC12
AA_permease
AA_permease_N
AA_permease_2
DUF7940
Motif
Other DBs
NCBI-GeneID:
133977987
NCBI-ProteinID:
XP_062272289
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Position
1:27803945..27816891
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AA seq
1042 aa
AA seq
DB search
MERLKSSQGEYENPAFDAILGDPPVYEETNLSNGENRTVRPSVVSAFGHDTLDRVPNINF
YRNAGSVSGHRAVRPSLQELHDVFQKNGAISVPDTVQDSGEGSDGTPSDDVESADPIVSD
KGAVKFGWIRGVLVRCMLNIWGVMLFIRLSWVFGQAGWGLGIVVIALSCVVTTITGLSMS
AICTNGVVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYVVGFAETVVDLLVEHD
LLMVDPLNDIRIVGVITVVFLLGISVAGMEWEAKAQIVLLVILLVAIVNVFVGTFIPATN
DKKSEGFFNYQSNIFLENFPPNFRDGESFFTVFSIFFPAATGILAGANISGDLQDPQAAI
PKGTLLAILITGITYLAVALSVSACVVRDATGNVTDIIAAGMQCGNSSAVSACELGYDFS
SCAEKSCKFGSMNNFQVMTMVSGFGPLIIAGTFSATLSSALASLVSAPKVFQALCKDNIY
KALHFFAKGYGKNNEPIPGYVLTFIISVGFILIGNLNIIAPIISNFFLASYALINFSCFH
ASYAKSPGWRPAYKFYNMWLSLVGAVLCCAVMFVINWWAALLTYGIEILLYIYVTVKKPD
VNWGSSTQAVTFVSAVGNALSLTGIDDHVKNFRPQILALTGSARSRPALLDLAHSISKNY
GLCITCDVFVGPRSEALEEMNAGMEKNQQWLRKTKRKAFYAAVACNKFREGTESLLQASG
LGRMKPNILMMGFKKNWRASSTEDLLTYVGVLHDAFDFEYGTVVLRMDQGLDLSHLVEAE
EEMLKAAKEQQSLETDMNGKKSRGMFRKSRNSSQQVLTTRVSVCGPPPPQVAKMNERLKE
ASAQFKKKQPKGTIDVWWLFDDGGLTLLLPYILTTRKKWKDCKLRIFIAGEPGRSEVDKQ
EMKSLLEKFRITYSEIIVIDDLHVRPSSNSLKKLDDMIEPFRLHEGSKDTPQAEAMRKEH
TWKITDEELSTFEEKTNLQIRLNELLQEKSKSANLIIVSMPIARKGSVSDHLYMAWLEVL
TQDLPPTLLIRGNHKSVLTFYS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctcaagtctagccagggggagtatgaaaaccctgcttttgatgcgatactg
ggtgatcctcctgtctatgaggagaccaacttatctaatggggaaaaccggactgtgcgg
ccctcggtggttagtgcttttggtcatgacactttggacagagtgcccaacattaacttc
tatcgtaatgcaggcagtgtgagtggtcaccgggctgtgcgaccttccctccaggagctc
cacgatgtctttcagaagaatggagcaatctctgtgccagacactgttcaggacagtggt
gaggggagtgacgggaccccctctgacgatgtggaatctgccgatcccattgtcagcgac
aaaggagcagtaaagtttggctggataaggggtgtcttggtgagatgcatgctgaacatc
tggggtgtgatgcttttcatccgtctgtcctgggtgtttggacaggcaggctggggtctg
ggaattgtggttatcgctctgagctgtgtggtgaccaccattactggcctttccatgtca
gccatttgcactaacggtgtggtcagaggaggaggagcctactacttgatatctcgcagt
ttgggaccagagtttggcgggtcaattggtctgattttcgcctttgccaacgcagtggct
gtagctatgtatgtggtgggatttgctgagacggtggtcgatttgctcgtggaacatgat
ctccttatggtggacccattgaatgacatcagaattgtcggagtcattacagtggttttt
ctgctgggcatatcagttgctggaatggaatgggaggccaaggcacagattgttcttctc
gttatcttgctggtagccatagtgaacgtatttgtgggaacattcattcctgcaactaat
gataagaaatccgaaggcttctttaattatcaatcgaatatcttcttagagaatttccct
ccaaattttcgagatggtgagagttttttcacagtgttttccatctttttccctgctgca
actgggatcctggctggagccaacatctctggagacttgcaggatcctcaagcagccata
cctaaaggtaccctgttggcaatcttaatcacaggcatcacctacctggctgttgccctt
tctgtctctgcctgcgttgtccgagatgccacaggaaatgtaactgacatcattgctgcc
ggtatgcaatgcggcaatagttccgcagtttctgcttgtgagctcggctatgatttctcc
tcctgcgcagaaaaaagctgcaaatttggctcaatgaacaacttccaggtgatgaccatg
gtatctggatttggtcccctcatcattgctggaacgttctcagccaccctttcatccgcc
ctggcttcccttgtcagtgctcccaaagtcttccaggcactgtgtaaagacaacatctac
aaggccctgcacttctttgctaagggatatggcaagaacaatgagccaatccctggatac
gtcctcactttcattatttctgtgggcttcattctcattggtaacctcaacatcattgct
cctatcatctcaaacttcttcttggcatcttatgctctcatcaatttctcctgtttccat
gcatcctacgccaagtctccaggttggagaccagcatataaattctacaacatgtggcta
tctctggtgggagcagtgctctgctgtgctgttatgtttgttatcaactggtgggctgct
ctcctcacatacggcattgaaatcctcctctacatttatgtgacagtcaagaagccagat
gtaaactggggttcatccacacaggctgtgacatttgtgagtgcagtcggcaatgctctg
tcactaactggaatagatgatcatgtcaagaacttcaggcctcagattttagcattgaca
ggttcagcacggtccaggccggctctcctagacctggctcactccatttcaaagaactat
ggactttgtatcacctgtgatgtgtttgtgggcccgagatcagaggcccttgaagaaatg
aatgctggcatggagaagaaccagcagtggctgaggaaaaccaaacgcaaggcattttac
gctgctgtggcctgcaacaaattcagggaagggactgaaagcctgctgcaggcttctggg
cttggtcgtatgaagcctaacatactgatgatgggcttcaagaaaaactggagggcttca
agcacagaggatttgctgacttatgtgggagtgctgcatgacgcatttgactttgagtat
ggaacagtggtgttgaggatggaccagggacttgatctgtcacaccttgtcgaagcagaa
gaagagatgctgaaggcagcgaaggagcaacaatcacttgagactgacatgaatggaaag
aaatccagaggaatgttcaggaagtccagaaattcctctcagcaagtgctcaccaccaga
gtgtcagtgtgcggtcctccacccccgcaggttgccaagatgaatgagaggctgaaagag
gccagtgctcagttcaagaagaaacagcctaaaggcaccattgatgtgtggtggctgttt
gacgatggaggtcttacccttctgctcccctacatcctcaccaccaggaagaagtggaag
gactgtaaattaaggatcttcattgcaggggagcctggacgcagtgaggtggataaacag
gagatgaagtccctcttggagaaattcagaattacctactctgagatcattgtcattgat
gacctccacgtcagacccagctctaacagcttgaagaagttggacgacatgatcgagcct
ttccgtctgcatgagggttctaaagacaccccccaggctgaagctatgcggaaggagcat
acctggaaaatcactgatgaagagctgtcaacattcgaggagaagaccaacctccagata
cgactgaatgagttgcttcaggaaaaatccaaatcagccaatctgatcattgtgagcatg
ccaattgcccgtaaagggtctgtctctgatcacctctacatggcctggctcgaagttctc
acacaggacctcccacccaccctgctcattagaggaaaccacaagagtgtgcttactttc
tactcttga
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