Scomber scombrus (Atlantic mackerel): 133978095
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Entry
133978095 CDS
T10651
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Spliceosome [BR:
ssco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133978095 (cpne1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133978095
NCBI-ProteinID:
XP_062272429
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Position
3:complement(28327601..28361157)
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AA seq
901 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGAIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVEAAAPTAGNANRQAGAAPIPTVQ
SGAGGRSGSHGNQGFNIPVSVTAPSSSQESASNKAVASLASVVSCFPNSYSSAPTITTAL
ASLNAGPPPMPPLPSMPSMPPMPTLPTIPHPPPVSSLPPVPTVSPLSQGPPVPPMSHLAH
MSSLPPFNPSLPPPAGLGSGLPLGTPNPMLFNPLSPLASLGLQAHMKAAAAAATGMASPD
EMFVLLQNLPFSCSEVEVRDFFRGLGVEGVRLLRDGQGRPTGRAMVKFFSPQDSFEAVKR
GGGMMGQRFIEITPGSERQWASLNNSMMGQAPHSIGKSINSHESQDQQLRRGNAGPGGRE
QRGRSRSPHRQEFCVYLKGLPYEADKKQIKEFFKNLAIVEDSIYIAYGPNGRATGEGFLE
FKSEQDYKTALGAHMQYMGTRFIQVHPISRKGMLEKIDMIRKREASQGEGKNQDGLKAPR
NCAHITNIPYNVSKKDVRAFLEGIGLYEDTLKVLTDSHGNGLGQAIFQLRTEEDARKAER
LHRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQNQNQQNQNQNQHQQAQPSPQQ
PQMNPFAGISGEEFNFLRNTMGNLNSAPFVTPFSAPGNGLAGPPPLPPLAAGLGDVNLGV
APPLVAGLPGAPILEPPGFRPGTAVGPPFSQDGLRGLVPFENANRKVGGGGPNRGGGANN
NQGRPGGGAVGGQPVFSPGPDGLRNQPAPGGANNPNGQRGAAGPTIVKLQNMPFTVTVDE
IMDFFYGYQVLQGSVCLQFSEKGLPTGEAMVAFQNHEEAAAAVMDLNDRPIGARKVKICL
G
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagtcatcaggctgcaaggtctgcccatagtggccggcaccatggacatcaga
cacttcttctctggcctcaccatccctgacgggggagtacacatcgtggggggtgagcat
ggcgaagccttcattgtctttgccactgatgaggatgctcggctggggatgatgcgtaca
ggcggggccattaagggctctaaagtgtcgttattgctcagtagcaagaccgaaatgcag
aacatgattgagttgagtcgccgcaggttcgaggctggggcaggcgctgtggaggcagct
gcacctacagcaggaaatgccaatcggcaagctggtgctgctcctatacccacagtgcaa
tctggggcaggggggagaagtggtagccatggaaaccagggttttaatattccggtctca
gtaacggcaccaagctcatctcaggagtcagcaagcaacaaggcagtggccagcctggca
agtgtggtgtcatgcttccccaacagctacagctccgcccccaccatcaccacagctctg
gcatcgctcaatgcaggccccccacctatgcctccacttcccagcatgccttctatgccc
cctatgcccacgctgcccaccattccacatcctcctccagtatcctccctcccccctgtc
cctactgtctcccctctttcccaaggacctccagtgccacctatgtcccacctcgctcac
atgtcttcccttcctcccttcaacccctccctgcctccccctgcaggactcggctcaggc
ctcccccttgggacccctaacccaatgctgtttaaccctctttcccctctggcctctctt
ggcctccaggcccatatgaaggctgctgctgctgcagccaccggaatggccagtccagat
gagatgtttgtcctcttacagaacctcccgttctcctgctccgaggtggaggtcagggac
tttttccggggtctgggggtggaaggggttcgtttgctgagagatgggcagggtcggcca
actggcagggctatggtaaaattcttctcgccccaggacagctttgaagctgtgaagcgg
ggagggggcatgatgggtcaaaggttcattgagattaccccaggctcagagaggcaatgg
gccagcctcaataacagcatgatgggccaagcccctcacagtatcggaaaatcaattaac
agccatgagtcacaggaccaacagctccgccgtggtaatgctgggcctggaggccgagaa
cagcgaggaaggtcacgatctcctcatcggcaggagttctgtgtctacctgaagggcctt
ccttacgaagctgacaagaaacagattaaggagttctttaagaatttggccattgtggag
gacagcatctacattgcctatgggcctaatgggcgggccacaggagagggctttcttgag
ttcaaatcagaacaggactacaagactgctctgggtgctcacatgcagtatatgggcacc
cgcttcatccaggtccacccaatcagccgcaagggaatgctcgaaaagatcgacatgatc
cgcaaacgtgaagcatcacagggtgaaggcaagaaccaggatggcttgaaagctccaaga
aactgtgctcacatcaccaacatcccctacaacgtctccaagaaggatgtccgtgccttc
ctggaggggattgggctttatgaggataccctaaaggttctgacagatagccatggcaac
ggtttagggcaagctatcttccagctgcggactgaagaagatgcccgcaaagctgaaaga
ttgcaccgccagaaactcaatggccgtgatgcctttgttcacttggtgacctttgagcag
atgaaggaaattgagaggaatcctcctccccaaaacaaaagagggcagcgaaatcagaac
cagaaccagcagaaccaaaatcagaaccagcaccaacaagcacagcctagtccccagcaa
ccccagatgaacccatttgctggaataagtggggaagagtttaactttctcagaaacacc
atggggaacctcaacagtgctccctttgtgactccattctctgccccagggaatggactg
gcaggcccccctcctctccctcctctggcagcaggactgggggatgtgaatctgggcgta
gctcctccgcttgttgctggtctgcctggggctccaatcctggagccacctggctttcga
cctggaactgcagtaggacctccattcagccaagatgggctgagaggcttggtgcccttt
gagaatgccaacagaaaagtaggtggaggaggaccaaacaggggcggaggggctaacaac
aaccaaggacgtccggggggtggggctgttggtggacagccggtgttctctccaggacct
gatggtctccgtaaccagccggctcctggaggagccaacaatcccaacggtcaacgcggt
gctgctggcccaacaattgtaaaacttcagaacatgccctttactgtaactgtcgacgag
atcatggacttcttctatggctaccaggtgctgcaaggctctgtctgcctgcagttcagt
gagaaaggcctgccaactggcgaggccatggtggccttccaaaaccacgaggaggccgct
gctgccgtcatggacctaaatgaccgacctattggagcacgtaaggtcaaaatttgcctg
ggttaa
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