Scomber scombrus (Atlantic mackerel): 133978158
Help
Entry
133978158 CDS
T10651
Name
(RefSeq) vimentin-like
KO
K07606
vimentin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133978158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133978158
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133978158
04147 Exosome [BR:
ssco04147
]
133978158
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
133978158
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
133978158
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133978158
Exosomal proteins of other cancer cells
133978158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Tropomyosin
FPP
DUF1664
PUMA_CC
EzrA
CENP-F_leu_zip
DegS
Sec10_N
Laminin_II
GIT_CC
DivIC
DUF7801
P22_AR_C
DUF4407
Baculo_PEP_C
Phage_GP20
SlyX
DUF3450
DUF5660
TPR_MLP1_2
ADIP
WXG100
Fzo_mitofusin
ZapB
COG3_N
YabA
DUF1192
TolA_bind_tri
Prominin
Motif
Other DBs
NCBI-GeneID:
133978158
NCBI-ProteinID:
XP_062272503
LinkDB
All DBs
Position
3:complement(21836161..21837312)
Genome browser
AA seq
378 aa
AA seq
DB search
MRAASYTQKSLQVSGSGSRVRVQSPSPSRCRGASYDSRGRAGFRGTAIELGTEIHQQHAN
EKEEMQELNVKFAGYIEKVQALEQRNAALKAELAALQSRYKGGPSGIGEEYELKFKEVRD
LIEALTNEKGAADIERGYIEEEVEVWKLKLEEELALREEAEMILREFRQDVDNATLQKAE
LERRIEQLVAEIEFLKKLHDEEVADLRKQIEDAKITAELDGDRPDLAAYLRNMRAEIEAV
AAKNVQEAEKWYKSKFDTLKEHAGKTEDQMKSMKEEITTFHNQVTDLQNQIDGLRSRNSA
LEQQLEDMEMSHMDKVESFEGVIAQLEAQLCETKLEMTKYLQDYQELLHIKLKLDAEIAT
YRKLLEGEEQRLGIAKDA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcatcttacacccagaagagcctgcaggttagcggctccggcagcagagta
agggttcagagcccatctccatcccgatgccgtggagcctcatacgacagccgcggacgt
gctggtttccgtggcacagccattgagttgggtacggagatacaccagcaacatgccaac
gagaaagaggagatgcaggagctcaatgtcaagtttgcaggatacattgagaaggtccag
gctctagagcagaggaatgctgctcttaaagctgagctagctgcactgcaaagccgctac
aaaggaggcccctcgggcatcggagaagaatatgaactcaagtttaaagaggtgcgggat
ctgattgaggccctgacaaatgagaagggagcagctgatattgagcggggttacattgaa
gaagaggttgaagtgtggaaattaaagctggaggaggaactggcccttagagaagaggca
gaaatgatcctgagagagtttcgtcaggatgttgacaacgccacactgcagaaggctgag
ctggagaggcgtatagaacaactggtggccgagatagagttcctcaagaaactgcacgat
gaagaggtggctgacctcaggaagcagattgaggacgctaagattaccgccgagctagat
ggggatcgacctgacctcgctgcctacttgcgtaacatgcgagcagagatagaggctgtc
gctgccaagaatgtccaagaagctgagaagtggtacaagagcaagtttgacaccctcaag
gaacatgctggcaaaactgaggatcagatgaagtccatgaaagaggagatcacgaccttc
cacaaccaggtgacagacctgcagaatcagattgacgggctgaggtctcgcaactccgcc
ctggagcagcagctagaggacatggagatgtcccacatggataaggtggagagctttgag
ggtgtcatcgctcagctggaggctcagctctgtgaaaccaaactggagatgaccaagtat
ctccaagactaccaggaactgctgcacattaagcttaagctggatgcggagatcgccacc
tacaggaagctgctggaaggtgaggagcagaggcttggaattgccaaagatgcctaa
DBGET
integrated database retrieval system
