Scomber scombrus (Atlantic mackerel): 133978180
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Entry
133978180 CDS
T10651
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
KO
K14961
COMPASS component SWD1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
133978180 (rbbp5)
COMPASS/SET1 complex (yeast)
133978180 (rbbp5)
MLL-HCF complex
133978180 (rbbp5)
MLL3/MLL4 complex
133978180 (rbbp5)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_LRRK2
Beta-prop_WDR75_1st
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_WDR11_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
133978180
NCBI-ProteinID:
XP_062272527
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Position
3:complement(28768914..28784872)
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AA seq
563 aa
AA seq
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MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQCHPRDM
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
NTQELVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PLQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTTVDPIVAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DAAVPATTPEDALTGGDKKQRQPSSEGPAKKKARTTTIELQGVPSDEVHPLLGVKGDGKS
KKKTAGRPKGSKGKDKDFPFRPKPYRGERPSFPVEALGSSGLGGGGGGGGMKGRAEGGLA
TGKHAASPDAESGSSASPAALLV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagaactgctcgaatcgttcgggcagaactacccagaggaggccgatggcact
ctggattgtatcagcatggccctgacctgcaccttcaaccgctggggcaccctgctggct
gttggctgcaacgatggccgaatcgtcatctgggacttcctcacacggggcatcgcaaaa
atcatcagcgcacatatccacccagtctgctctttatgttggagtcgagacggccacaag
ctggtgagcgcctccacagacaacatcgtctcgcagtgggacgtccttactggagactgt
gaccagaggtttcgcttcccttcacccatcctgaaactgcagtgccatcccagagacatg
gacaaagtgctggtgtgtcccatgaagtcggccccggtcctgttgactctgtcagattcc
aaacacgttgtccttcctgtggacgatgattcagacctgaacgtggtggcggcttttgac
aggcggggcgagtacatctacactggaaacgccaaaggaaagattctggtgctgaacaca
aacactcaggagctggtggcttccttcagagtgaccaccggcaccagcaacaccaccgcc
atcaaatccatcgaatttgcacgcaagggcagttgcttcctcataaacacagcagaccgg
atcatcagagtgtatgacggcagggagatcctgacctgtggcagagacggtgagccggag
cctttgcagaaactacaggacctggtcaacaggactccgtggaagcgctgctgtttctcc
ggagacggcgagtacattgtggccggttcagccaggcagcacgccctttacatctgggag
aagagcatcggaaacctggtgaagatcctgcatggaaccagaggagagctgctgctggat
gtcgcttggcatcctgttcgtccaattattgcctccatctccagtggagtggtgtccatc
tgggctcagaatcaagtggaaaactggagcgcttttgctccagacttcaaagaactggat
gagaatgtggagtatgaggagagggagtctgagtttgatattgaggacgaagacaagagt
gaacctgagcagacaggtgcagacgccgcggaggacgaagaggtggatgtcaccactgtt
gatcccatcgttgccttttgtagcagtgatgaggagctggaggactataaagccctgctg
tacctgcccatcgctccagaggtggaggacccagaggaaaaccccttcggccctccgccg
gacgcagcggttccggccaccactccagaggacgcactgaccggcggcgataagaagcag
cggcagccttcgtctgaaggcccggccaagaaaaaggcccgcactaccaccattgagctg
cagggggtgcccagtgacgaggtgcaccccctactgggcgtgaagggggatggcaagtcc
aagaagaagacagcaggccgccccaaaggctccaaaggtaaagacaaagacttccccttc
aggcccaagccctacaggggcgaacggccctccttccccgtggaagccctgggcagctct
ggcctgggaggaggaggaggaggaggagggatgaagggcagggcagaggggggcctggcc
acaggtaagcatgctgcatcccctgatgctgagtctgggagctctgctagtcctgctgcc
ctgctagtctga
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