Scomber scombrus (Atlantic mackerel): 133978230
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Entry
133978230 CDS
T10651
Symbol
atg7
Name
(RefSeq) ubiquitin-like modifier-activating enzyme ATG7 isoform X1
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04136
Autophagy - other
ssco04140
Autophagy - animal
ssco04145
Phagocytosis
ssco04216
Ferroptosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
133978230 (atg7)
04140 Autophagy - animal
133978230 (atg7)
04136 Autophagy - other
133978230 (atg7)
09143 Cell growth and death
04216 Ferroptosis
133978230 (atg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133978230 (atg7)
04121 Ubiquitin system [BR:
ssco04121
]
133978230 (atg7)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133978230 (atg7)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
133978230 (atg7)
Atg8 conjugation proteins
133978230 (atg7)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
133978230 (atg7)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133978230 (atg7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG7_N
ThiF
NUP58_M
Shikimate_DH
CSNKA2IP
Motif
Other DBs
NCBI-GeneID:
133978230
NCBI-ProteinID:
XP_062272615
LinkDB
All DBs
Position
3:complement(21425944..21710115)
Genome browser
AA seq
720 aa
AA seq
DB search
MASDTSEAGTSAADLKLQFAPFSSALEAGFWHQLTQKKLNDYRLDESPKCIRGYYYNGDP
VGLPTRLTLEFSAFDVDGPTPARCCPAIGTLYNTNTLDAFKTIDKKSLLEKEAKEIWDAI
QSGAALKDQSILSRFILLTFADLKKYHFYYWFCFPALCFSEGIKIVQQPSVLEQVFSAKQ
IAALQEIYDGLCSKRETTAIPYFLLKYTDDTVQMAPLEDWDTFLTDTKKVTVGVYDPCTL
SQHPGWPLRNLLVLLAYRWGSKVDTVEVLCFRDRTLQGSRSIQHSVVFQVKLPELSVNSA
CPKSVGWEKNPKGAMGPRMVNLSECMDPKRLAESSVDLNLKLMRWRLVPSLDLDKVVSTK
CLLLGAGTLGCNVARTLMGWGVRHITFVDNAKISYSNPVRQPLYEFEDCLGGGKSKAMAA
VDRLSKIFPGVNAEGHNMSIPMPGHPVNFSQATLSQAQRDVEQLEKLISEHDVVFLLMDT
RESRWLPTVIAASKRKLVVNAALGFDTFVVMRHGLKKPSVSQTVSAAADSSPSCSSASSS
SSTPASAETSVPGSSLFSNIPGHKLGCYFCNDVVAPGDSTRDRTLDQQCTVSRPGLAMIA
GALAVEMMVSILQHTEGGYAVASSSDDRMNEPPTSLGLVPHQIRGFLSRFDNVLPASLAF
DKCTACSPIVLDHYEREGFQFLSKVFNSSHSFLEDLTGLTLLHQETQAAEIWDMSDDESI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgacaccagtgaagcaggaacctccgcggcagacctcaagctgcagtttgct
cccttcagcagtgccctggaggcaggcttttggcaccagctcacccagaagaaactcaat
gactacaggttggatgagagtcccaaatgtatcagaggatactactacaatggtgatcca
gttggtttgcctactcgcttgactttggagttcagtgcatttgatgttgatggtccgacc
ccggcccgttgttgtccagctattggaacgctgtataacaccaacacactagatgccttt
aagaccatcgataagaagtctctgctggagaaagaggccaaggagatatgggatgccata
cagtctggggctgcattgaaggaccaatccatcctgtccagattcattctgctgaccttt
gcagatttaaagaagtaccatttctactactggttctgcttccctgcgctctgcttctca
gagggaataaagattgtccagcagccttctgtcctagaacaagttttctcagcaaaacag
attgcagccttgcaggagatctatgatggtctgtgtagcaaaagagagaccactgcgatt
ccttacttcctattgaagtacacagatgacactgtccagatggctccattagaggactgg
gatactttcctcactgatactaagaaggttactgtgggtgtctatgatccgtgcacgctg
tctcaacatccgggctggcctttgagaaatctactggtcctcttagcttaccgatggggc
tctaaggtggacacagtggaggtgctgtgtttcagggacagaactctgcagggaagtcgc
tccattcagcacagtgtcgtctttcaggtcaaactccctgaactttccgtcaactcagct
tgtcctaagagtgtaggttgggagaagaaccccaagggggcaatgggacccaggatggtc
aacctcagtgaatgcatggaccctaaaaggcttgcagagtcatctgtggacctgaacctg
aagctaatgaggtggaggctggttccttccctggacctggacaaggtggtcagcacaaag
tgtcttctactgggagcagggactctgggctgcaatgtcgccaggactctcatgggatgg
ggagttagacacatcacatttgtagacaatgcgaagatctcgtactccaatcccgttcga
cagcctctctatgagtttgaagactgtcttggaggagggaagtccaaagccatggcagcc
gttgaccgactctccaaaatctttcctggtgtgaatgcggagggtcacaatatgagcatc
cccatgcctggccacccagtgaatttctctcaagccactctctcccaggctcagagggat
gtcgaacagctggagaagcttatctcagaacatgatgtggtcttcttactgatggatacg
agggagagccgctggctgcctacagtgatcgctgccagcaagaggaagctggtggtgaat
gctgctctagggtttgatacatttgtggtgatgcgccatggcctgaagaaaccctccgtc
agtcagactgtttctgcagcagcggactcctcaccctcctgttcctctgcttcctcttcg
tcctccacacctgccagcgctgagacctccgtcccaggatcctctctgttctccaacatc
ccagggcacaagctggggtgctacttctgcaatgatgttgtggcaccaggggattcaacc
agggatcggacactggatcagcagtgcaccgtcagcagaccaggtttggccatgattgcc
ggagccctggctgttgagatgatggtgtccattctgcagcacactgaaggaggctatgca
gtggccagcagcagtgatgacagaatgaatgaaccacccacctccctgggtctcgtgcca
catcagatccgaggcttcctctcaaggtttgacaacgtcctgcctgccagtctggccttt
gacaaatgcacagcctgctcaccaattgtcctggaccactatgagagggaaggtttccag
ttcctgtccaaggtttttaattcttcccactccttcctggaagacctgacagggctgacg
ttgttgcaccaggagacgcaggccgcagagatttgggatatgagcgacgacgagagcatc
tga
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integrated database retrieval system
