Scomber scombrus (Atlantic mackerel): 133978459
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Entry
133978459 CDS
T10651
Name
(RefSeq) transducin-like enhancer protein 4 isoform X1
KO
K04497
groucho
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04310
Wnt signaling pathway
ssco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133978459
04330 Notch signaling pathway
133978459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133978459
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
133978459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TLE_N
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
CFAP251_N
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_NOL10_N
ASA1
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
HALZ
WD40_RFWD3
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
133978459
NCBI-ProteinID:
XP_062272659
LinkDB
All DBs
Position
4:23846609..23882041
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AA seq
807 aa
AA seq
DB search
MIRDLSKMYPPARHPIPHQPGQPFKFTVTESCDRIKEEFQFLQAQYHSLKMECEKLASEK
TEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVIPFLSQEHQQQVVQAVERAKQV
TMAELNAIIGVGVFRNLALINISVCVIQQQQLQAQHLSHSHAIPIPLTPHPAGLQPPLPP
GAGTASLLALSSALSHQLPLKDERKHHDSNSEHPRGKSCSVSVHASVGVFVSTKHTSVSS
SVSPSASLRTGEKHRSSGDYSSDSKKQKTDDKELASTRYESDGEKSDDNLVVDVSNEDPV
SPRGSPAHSPRENGLDKSRLLKKDAPLSPSSIASSSSTPSSKSKEINLNEKSTTPVSKSS
TPTSRSDAPTPSSTVTPGLRSAPSKPAVIETLAPGLRTPLAVPCSYPGPFGMVPHPGMNG
ELSGAGAAYTGLHNISPQMSAVAAAAVAAYGRTQVVGFDPHHHIRVPGLPPNLSGIPGGK
PAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTRHVYTGG
KGCVKVWDISHPGNKTPVSQLDCLNRDNYIRSCRLLPDGRTLIVGGEASTLSIWDLATPT
PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID
ISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEV
LHVTKPDKYQLHLHESCVLSLRFAHCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVL
SCDISIDDKYIVTGSGDKKATVYEVIY
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgattagagatctgagcaagatgtaccccccggcgcggcatccgattccccaccagccg
ggacagccgttcaagttcactgtcactgagtcctgcgaccggatcaaggaggagttccag
ttcctccaagcccagtatcacagcctgaaaatggagtgtgagaaactggccagtgagaaa
acggagatgcagcgacactatgtcatgtactacgaaatgtcgtatggactcaacatcgag
atgcacaaacaggcggagatcgtcaaacggctgaacgcaatctgcgcccaagtcattccc
ttcctctctcaagagcatcagcagcaggtggtgcaggcagtggagagggccaaacaggtc
accatggctgaactcaacgccataattggagtgggtgtatttcgaaatctagcattaatc
aatatctctgtgtgtgtgattcagcagcagcagctccaggctcagcacctctcccacagc
cacgccatcccgatcccactcacgccacacccagcaggcctccagccccctctgcccccg
ggtgccggtactgccagcttgctggcgctctcctcggccctgagtcaccagctgccactc
aaagacgagaggaaacaccacgacagcaacagtgaacacccgcgaggtaagtcctgctct
gtaagtgtgcatgcaagtgttggcgtctttgtgtctacaaagcatacatcagtgagctca
tctgtgtctccatctgccagtttgcggactggagagaagcacagaagttcgggcgattac
tcctctgacagcaagaaacagaagacagatgataaggagttggcctctacacgctacgaa
agtgacggagagaagagcgatgacaacttggtagtggatgtgtccaatgaggatccagtg
tctcccagaggaagtcctgcccactctcctcgggagaacgggttggacaagagtcggctg
ttgaagaaggatgcccccctgagtccttcctccatcgcctcctccagcagcacaccttca
tccaaatccaaagagattaatttgaatgaaaagtccacaacacctgtgtccaagtccagt
acccccacatcccgctctgatgctccgactcccagcagcactgtcacccccggcctgagg
tctgcacccagtaaaccagcagtaatcgagacgctggctcctggtctccgcacaccgctg
gcagtgccgtgctcgtaccccggcccgtttggaatggttcctcacccgggtatgaatgga
gagttgagcggagcaggagcagcctacaccggtctgcataacatttccccacagatgagc
gcggtggctgctgctgctgtggctgcttatggacgcacacaagtggtgggatttgatcct
caccaccacatacgtgtccctggccttcctcctaacctgtcgggcattccaggtggaaaa
cctgcttactcctttcatgtgagcgctgacggacaaatgcagcctgtgccttttcctccg
gatgcactgatcggccccggcatcccgcgccacgcacgacagatcaatactcttagccac
ggggaggtggtatgtgctgtcaccatcagtaacccaacgcgtcatgtctacactggcggc
aagggctgcgtcaaggtgtgggacatcagtcacccgggcaacaagacccctgtatcccag
ctggactgccttaacagagataactacatccgttcctgtcgactacttccggacgggcgg
actctcatagtcgggggcgaggcgagtactttgtcaatctgggatttggccacaccaact
ccacggatcaaggcagaactcacttcgtcagcacctgcttgttatgctctggccatcagc
cctgactccaaggtctgcttttcctgctgctccgatggaaacatagctgtctgggacctt
cacaaccagactctggttaggcagttccagggccacaccgacggagccagctgtatagac
atctctaacgatgggaccaagctttggacaggaggtctggataacactgtccggtcctgg
gacctgagagagggacggcagttgcagcagcacgacttcacctcacagatcttctcactg
ggatactgtccaacgggcgagtggctggcagtggggatggagaacagtaatgtggaggtc
ctacatgtcaccaaacctgacaagtaccagctccacctacatgaaagctgtgtgctctca
ctcagatttgcccactgcgggaagtggtttgtgagcactggaaaagacaatctgctcaac
gcatggagaaccccatatggagccagcatattccagtcaaaggagtcgtcttcggtgctg
agctgtgacatctccatagatgataagtacatcgtgactggctcaggagataagaaagcg
actgtctacgaggtcatctactaa
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integrated database retrieval system
