Scomber scombrus (Atlantic mackerel): 133978490
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Entry
133978490 CDS
T10651
Symbol
rmi1
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133978490 (rmi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133978490 (rmi1)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
133978490 (rmi1)
FA (Fanconi anemia) pathway
133978490 (rmi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
133978490
NCBI-ProteinID:
XP_062272723
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Position
4:complement(18211289..18224122)
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AA seq
726 aa
AA seq
DB search
MAPEIQVVVRATQTWLQSSWHVQVPFAWLEACVEWLQEEAGGAGRLSQQQINQQALDQWL
LTDLRDLDYPVLPEGLAQPQKTELRGIFCVQVDSLLDISQPAYGQLQKWRGTACANDEVS
AITQNTQRPWEARTTRMLLLQVTDGVQSLEAMEYQPIPALTSALRPGVKLQLQGNMVCRL
GMLLLGPSNVKVLGGEVEDLVDRNNQERVLCRTLGLPEEQQQDGEEAQPSHQGNQESEDL
ELDDQDLLASLEAQEEVERPPVWPVRDSGYRTRSEPSTQSLRSSSVRSLISSASSRSEAS
AHSYSSGLTQSSRGGSVQGYRHIDEQEESDLIDHLSSDHVIQQENTDHSMADEDFPDEDF
DDLPLDELDSVIFQESTDVTARSDSGHRSTSQDHNRITGSSSDRTTKPQTAQFEQPILTG
SASRLSSSNSRFTSQQRDSQSCMRGALGPSVEANFKPVFSSTASEPSCERGRSLTNDESD
FMDEDMDCFLEEVDTYGVQTREPDVHQGPSRDREYATKQTETSGTGFKVTCKSSSNVADT
FKESSHSVPQRQSHTSSSAEFHRLSARNDPQGDSTVPVLSLTSPPFTYLCLLDELISKPH
PHSIKICIKAFIVTLLGKLSSNNGVWRVSATISDGTGYLDVELSDEVLIGLLSFSVAEKG
ALKRDPARRHELDAGMRRCQEELVDMCCVMTIAVEPEGKNAVVTKADPVNEKVLQELERK
VRDRRK
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgagatccaggttgtggtacgtgcgacccaaacctggctgcagtcgtcctgg
catgttcaggtgccctttgcctggctggaagcctgtgtggagtggctacaggaggaggca
ggaggagcaggtcgtctgtcacagcagcaaatcaaccaacaggcgctggaccagtggctg
ttgacagacctgagggacctggactaccctgttctccctgaaggactcgctcaaccccag
aagacagagctcaggggcatcttctgtgtccaggttgactcattactggacatcagtcag
cctgcgtatggtcagctgcaaaagtggcggggcacagcatgtgccaatgacgaggtgtct
gctatcacacagaacacacagaggccctgggaagccaggacaacccgtatgctactactg
caggtgacagatggagtccagagcttggaagccatggagtatcagcctatacctgcactg
acctcagctcttaggcctggtgtgaagctgcagttacaagggaacatggtttgcagactt
gggatgctgttgttggggccgtccaacgtcaaggtcctgggtggtgaggtggaagacttg
gtggatagaaacaaccaggaacgagtgctgtgtcggacgctgggacttcctgaagagcag
caacaggatggggaagaggctcagccatcacaccaaggcaaccaggaatctgaggacctt
gaactagatgaccaagacttgttggccagtctggaggcccaggaggaggtggaaaggcct
ccagtttggcctgttagagacagcggctacaggacacgcagcgagccctccactcagtct
ttgagaagctcctctgtcaggagcctcatctcatctgcctcatccagaagtgaagcctcc
gcccactcatacagcagtggtttgacccagagcagcagaggtggttcagtccaaggttac
cgacacattgatgaacaagaggagtctgacctcattgaccacttatcttctgaccatgtg
attcaacaagagaacacagatcacagcatggcagatgaagattttcctgatgaagatttt
gacgaccttcccctggatgagttggacagtgtgatttttcaggaaagcacggatgtcacc
gcacggtccgatagtggtcacagaagcacgtcacaggatcacaacagaataacgggaagt
agttcggacagaacaacaaaaccccaaactgctcagttcgagcagcccattttgaccggc
tcagcatcacggcttagctcaagcaactccagatttacttcacaacagagagacagtcaa
agctgtatgagaggagctttaggaccttcagttgaagcgaatttcaaacctgtcttttcc
tcaacagcttcagagccatcatgtgaaagaggccgttctctaactaacgatgagagtgat
ttcatggatgaggatatggactgctttcttgaagaggtagacacctatggagtgcaaacc
agagagccagatgttcaccaaggacctagcagagacagagagtatgctacaaaacaaaca
gaaacttcaggcaccggttttaaagtgacctgcaaatcatcaagcaatgtagcagatacc
tttaaggaaagctcacacagcgtacctcagaggcaaagtcacacctcaagctctgcagaa
tttcatagattatctgcaagaaatgacccacagggtgacagcactgtccccgttctctcc
ctgacctctccaccatttacatacttgtgcctgctagatgaactgatctctaaaccacac
ccgcactccataaagatctgcatcaaagctttcattgtgactctcttggggaaactgagc
agcaacaacggtgtttggcgggtcagcgctacaatatctgacggaactggttacctggac
gtggagctgtcagatgaggttttgataggcctgctgagtttctctgtggcagagaagggt
gctctaaagcgcgaccctgccaggagacatgagctggatgctggaatgagaagatgtcaa
gaagagctggtggacatgtgttgtgttatgactatcgcagttgaaccagaggggaaaaat
gctgtggtgaccaaggcagaccctgtcaatgagaaagtactccaggagctagagcggaag
gtgagagacaggagaaaataa
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