Scomber scombrus (Atlantic mackerel): 133978545
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Entry
133978545 CDS
T10651
Symbol
smarcb1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
ssco03250
Viral life cycle - HIV-1
Brite
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133978545 (smarcb1a)
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133978545 (smarcb1a)
SWI/SNF complex
133978545 (smarcb1a)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133978545 (smarcb1a)
PBAF complex
133978545 (smarcb1a)
SWI/SNF complex
133978545 (smarcb1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133978545
NCBI-ProteinID:
XP_062272791
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Position
4:31608993..31619007
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AA seq
373 aa
AA seq
DB search
MALSKTFGQKPVKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRKLASVDERKKI
VESSHDHGYTQLATSVTLLKAAEVEEILEGNDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENATQSEVLVPIRLD
MEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDS
ILEEQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagtaaaacatttgggcagaaacctgtcaaattccagctggaggaggatgga
gacttttacatgatcggctcggaggtggggaactacctccgtatgttcagaggctcactg
tataagagatatccgtcgttatggaggaaactggcatctgtagacgagcggaagaagatt
gtggagtcatcacacgatcacggttacactcagctcgccaccagcgtgactctgctgaaa
gccgcggaggtcgaggagatcctggaaggaaacgatgagaagtacaaagctgtctccatc
agcacagagccgcccgcctacctcagggaacagaaggcaaagaggaacagtcagtgggtt
cctacgctgcccaacagctctcaccacctggacgctgtgccctgctccaccaccatcaac
cgcagccgactgggacgcgacaagaagaggactttccctctgtgctttgacgaccacgac
ccagcagtgatccacgagaacgccactcagtccgaagtcctggttccgatccgtctggac
atggagatcgagggacagaaactcagagacgctttcacctggaacatgaacgagaagctg
atgacgcccgagatgttcgctgagatcctgtgtgacgacttggacctgaacccgctggcc
ttcgtccccgccatcgcctcggccatcagacagcagatcgagtcgtatccgacagacagc
atcctggaggagcagacggaccagagggtcatcatcaagttgaacatccacgtgggcaac
atctctctggtggaccagttcgagtgggacatgtccgagagggaaaactctccggagaag
ttcgctctgaagctttgctccgagctcggcctgggaggagagtttgtcaccaccatcgcg
tacagcatccgaggtcagctgagctggcaccagaggacgtacgccttcagtgagaacccg
ctgcccacggtggagatagccattagaaacacaggcgatgctgaccagtggtgccccctg
ctggagacgctgacagacgcagagatggagaagaagatcagagaccaggacagaaacacg
aggcgaatgaggcgactggcgaacacggctcctgcgtggtaa
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