Scomber scombrus (Atlantic mackerel): 133978612
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Entry
133978612 CDS
T10651
Name
(RefSeq) far upstream element-binding protein 3-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133978612
03041 Spliceosome [BR:
ssco03041
]
133978612
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133978612
Spliceosome [BR:
ssco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133978612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Secretin_N
FUBP_C
Motif
Other DBs
NCBI-GeneID:
133978612
NCBI-ProteinID:
XP_062272882
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All DBs
Position
4:33878228..33901776
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AA seq
538 aa
AA seq
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MMAELVQGQASMSQPGLKADGLADVLQRARQMVGKMGGEAMSHLNSSSGSVEPSLYYAGQ
KRPGEDGVGNQLAAMGHQRVITEDYKVPDRMVGFIIGRGGEQITRIQLESGCKIQIAADS
GGLMERPCSLTGTPESIEQAKRLLVQIVDRCRNGPGFHGDGEGGASVQEMLIPASKVGLV
IGRGGDTIKQLQERAGVKMMMIQDGPMPTGADKPLRISGDPYKVQAARELVLEVIREKDG
DFRSGRNDFTARLGGTSLDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKADDGISPE
RVAMVMGQPDRCQHAVHLINELIQTAQERDGFGSALRSGRVRGRGDWTMGSPGPLQEVTY
TIPADKCGLVIGKGGETIKSINQQSGAHVELQRNPPPSTDPNTRVFTIRGTAQQMDLARQ
LIDDKIGGSGIMSNGGFGFSPFTQGPATHQNCGSGQTFLTGVWGNTYQTSWQNPGQQDPG
QQSQPQSLMTDYSKAWEDYYKKQSQSSQQSSVPDYTAALAEYYRQQPYLWNAAQIQDH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggagctggtgcagggacaggcctcgatgagccagccggggctgaaggcagac
ggcctggccgacgtgttgcagcgggctcggcagatggtgggtaagatgggcggagaagcc
atgtctcacctcaacagctcctcaggaagtgtggaaccttcgctgtactacgccggtcag
aaaagacccggagaggacggagtagggaaccaactagcagccatggggcatcaaagggta
atcacagaggattacaaggtcccagacaggatggtgggtttcataatcggccgaggaggt
gaacagatcaccaggatccagctggagtccggctgtaagatccagatcgctgctgacagc
ggaggtctgatggagcggccgtgttctctgaccggaaccccggagagcatcgaacaggcg
aagcggctgctggtccagatcgtcgaccgctgcaggaacggtcctggtttccatggcgac
ggagagggcggggcctctgtgcaggagatgctgatcccggccagtaaggtggggctggtg
attggtcgaggaggcgacaccatcaagcagctgcaggagcgagcgggagtgaagatgatg
atgatccaggacggtccgatgccaacaggagctgacaagccgctccgcatctctggagac
ccgtacaaagtgcaggcagcgagggagttggtgttggaggtgatccgagagaaggacgga
gacttcagatcgggacgcaacgacttcaccgcccgactgggaggaaccagcctggacgtt
ccggttcccaggtttgctgtcggcatcgtgatcggccggaacggagaaatgattaagaag
atccagaatgatgcaggagtccgaatccagtttaaagcagatgatggcatcagtccagag
cgtgttgccatggtgatgggtcaaccggaccgctgtcagcatgctgttcacctcattaat
gaactgattcagaccgcacaggagcgtgacggcttcggctcggctctgaggagcggcagg
gtcagaggtcgtggtgattggaccatgggctctcccggtccgctacaggaagtgacctac
accatccctgctgataagtgcggcctggtcatcggcaaaggtggagagaccattaagagt
attaaccagcagtctggagctcacgtggagctgcagaggaaccctcccccctccaccgac
cccaacacccgggtcttcaccatcagaggcacggcccagcagatggacctggcccgccag
ctcatagacgacaagatcgggggttcagggattatgagcaacggaggctttggattcagt
cccttcacccaggggcctgctacacaccagaactgtggcagcggtcaaaccttcctgact
ggagtttggggaaacacctaccagaccagctggcagaacccgggacaacaagacccaggt
cagcagagccaacctcagagcctgatgacagactacagtaaggcctgggaggactactac
aagaaacagagtcagtcgtctcagcagagttcggtgccagactacactgcagcgttagca
gaatattacagacagcagccctacctgtggaacgccgcccagatacaggatcactag
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