Scomber scombrus (Atlantic mackerel): 133978749
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Entry
133978749 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: dynamin-1-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
ssco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133978749
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133978749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133978749
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133978749
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
133978749
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
133978749
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
133978749
RhoA-dependent endocytosis
133978749
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133978749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
PH
MMR_HSR1
AAA_16
DUF5130
Ldh_1_N
Motif
Other DBs
NCBI-GeneID:
133978749
NCBI-ProteinID:
XP_062273046
LinkDB
All DBs
Position
4:complement(34297215..34323567)
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AA seq
846 aa
AA seq
DB search
MGNRGMEDLIPLVNQLQDAFSSIGQNATLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRG
SGIVTRRPLVLQLINCPTEYAEFLHCKGKKFTDFDEVRQEIEAXTDRITGQNKGISPVPI
NLRVYSPNVLNLTLVDLPGXTKVPVGDQPADIEQQIREMLMQFVTKDNCLLLAVSPANSD
LANSDALKIAKEVDPQGLRTIGVITKLDLMDEGTDARDILENKLLPLRRGYIGVVNRSQK
DIDGRKDITAALQAERKFFLSHPSYRHLADRMGTAHLQKALNQQLTNHIRDTLPALRSKL
QSQLLSIEKEVEEYKNFRPDDPSRKTKALLQMVQQFAVDFEKRIEGSGDQVDTYELSGGA
KINRIFHERFPFELVKLESDEKTLRKEISYAIKNIHGIRTGLFTPDMAFETIVKRLIAQI
KEPCQKCIDMVINELVNTVRQCTQKLAQYPLLREEMERIVTQHIRDRESRAKEQVMLLID
IELAYMNTNHEDFIGFANAQQKSSQMSKKKAAGNQDEIMVIRKGWLTINNIGIMKGGAKE
YWFVLTAETLSWYKDDEEKDKKYMLTVDNLKLKDIEKSFMSSKHIFALFNTELRNVYKDY
RQLELASESQEEVDSWKASFLRAGVYPERNVDKEKVEVEESSSDGQIHSMDPQLERQVEI
VRNLVDSYLGIIHRTVRDLIPKTIMHLMVNNTKEFIHSDLLAQLYSCGDQNTLMEESQEQ
GQHRDEMLKMYYALREGLSIIGDISTTTFTTAMPPPVDDSWLQVTGMPSGRRSPMSSPTP
QRRAPPGPPRPGGRAAPTRPAVSPDPGGPPPSVPSRPNRAPPPGVPSRPNKGSPAHGESP
QSSIEG
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccgcgggatggaggatctgatcccgctggtcaaccagctgcaggacgctttc
tcctccatcgggcagaacgcgactctggatctgccgcagatcgcagtggtgggaggacag
agcgccgggaagagctccgtgctggagaacttcgtgggcaaagacttcctccctcgtggt
tcaggtattgtgactaggcgtccgctggtgctgcagctcataaactgtccaacagagtac
gcagagttcctgcactgtaaagggaagaagttcacagactttgatgaagttcgtcaggag
atcgaagctnnaactgatcgaatcaccggacagaacaaaggaatcagtccagtacccatc
aacctgagagtgtactcacccaacgtgctgaacctgaccctggtggatcttccgggantg
acgaaggtcccggtaggcgaccagccggccgacatcgagcagcagatcagagagatgctg
atgcagttcgtcactaaggataactgcctcctattggctgtttctcccgccaactctgac
ctcgccaactctgacgctctgaagatcgccaaggaggtcgacccacaaggtctgaggacc
atcggtgtgatcactaagctggatctgatggatgaaggaaccgatgccagagacatcctg
gagaacaaactgctgccactgcgcagaggttacatcggggtggtgaaccgcagtcagaag
gacatcgatggaaggaaagacatcacggcggcgctgcaggctgagaggaagttcttcctg
tctcacccgtcctaccgacacctggccgaccgcatgggcaccgcccacctacagaaggcc
ctcaaccagcaactgaccaaccacatccgggatacgttgccggcgctacgcagcaaactg
cagagccagctgctgtccatcgagaaggaggtggaggagtacaagaacttcagaccggac
gacccgagccgcaagaccaaggccctgctgcagatggtgcagcagtttgcggtggacttt
gagaagcggattgaaggatctggagatcaggtggacacctacgagctgtcaggaggagcg
aagatcaaccgaatcttccacgaacgcttccccttcgaactagtcaagttggagagtgat
gagaagactcttcgtaaagagatcagctacgccatcaagaacattcatggcatcaggacg
ggtctgttcacacctgacatggcgtttgagacgatcgtgaagcgtctgatcgctcagatc
aaagaaccgtgtcagaaatgtatcgacatggtgataaatgagctggtcaacactgtgagg
caatgtacacaaaagctggctcagtatcctctgctcagagaggagatggagagaatcgtc
actcagcacatcagagacagagagagccgcgccaaagagcaggtaatgctgctgattgac
attgagctggcctacatgaacacaaaccatgaagacttcatcggctttgcaaatgctcag
cagaagagcagtcagatgagcaagaagaaagcagcaggaaaccaggatgagatcatggtg
atccgtaaaggctggctgaccatcaacaacatcggcatcatgaagggaggagccaaagag
tactggttcgtcctcacagcggagactctgtcctggtacaaagatgatgaggagaaggac
aagaagtacatgctgactgtcgacaacctgaagctcaaagacatcgagaagagtttcatg
tccagcaaacacatcttcgccctgttcaacaccgaactcaggaatgtgtataaggactac
cgtcagctggagttggccagtgagtctcaggaggaggtggacagctggaaggcttctttc
ctacgagccggagtgtaccctgaacgcaacgtggataaagagaaggtggaggtggaggag
tcgagctcagacggacagatccacagtatggaccctcagctggagcggcaggtggagatc
gtcaggaacctggtggactcttacctcggtatcatccaccgaaccgtcagagacctgatc
cccaagaccatcatgcacctgatggtcaacaacacgaaggagttcatccactctgacctg
ctggctcaactttactcctgtggagaccagaacaccctgatggaggagtcccaggagcag
ggtcagcaccgtgacgagatgctgaagatgtactacgctctgcgcgagggcctcagcatc
atcggtgacatcagcaccaccaccttcaccacggcgatgcccccgcctgtggacgactcc
tggctgcaggtgacggggatgccgtcaggacgcaggtctcccatgtccagtccgaccccc
cagcgtcgggcccctccaggaccccctcggcccggtggacgtgccgcccccactcgtccc
gcagtgtcacctgacccaggtggacctccaccttctgtcccgtctcggcccaacagagcc
ccgccgcccggcgtccccagtcgccccaacaaaggtagccccgcccacggagagagcccc
cagtcttctatcgagggttaa
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