Scomber scombrus (Atlantic mackerel): 133978756
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Entry
133978756 CDS
T10651
Symbol
pdzd2
Name
(RefSeq) PDZ domain-containing protein 2
KO
K24058
PDZ domain-containing protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
133978756 (pdzd2)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133978756
NCBI-ProteinID:
XP_062273053
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Position
4:851925..894298
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AA seq
2444 aa
AA seq
DB search
MPITQDNALGILPLLEEWLVAQTRGSQQEYNLNRDTSCLKHVDQDSYQNGEGDSVCNSSS
VNSLNIKDMSLCLAAIQKLVEYISFNFMEGDTAPSASPSSCREGLDVEVHAVCLSKEEGD
AAEFGLSFGNIPIFGDSDRRKKGGPRRRRDQNPIMDVGCIWVTEVRKRSAASLCGRIKLR
DELLSLNGQLMVGVDVSGASYLADQCWNGGYIYLILLRRVKRKAPLPPCDADGRDRAVSE
PPDSSANCKRTRKFGVISRSFFNRDNRDRDSTDSEVQGCYNGHNSSISTDAGVSPPGDDS
GCILSTHTTTEESPDTVPHMRTAQQHLYIQGAATLPAMCHSQLLEYKMDSFSSEPSNQPR
ESSHIWKMHLVKGQEGLGIQITGGRGSKRSPHGIIIAYIEEGGAIHRDGRLHAGDELLMV
NGQSLVGLTHQEAVAILRSTTGLVQLVVASREESDVGFQHFPSTSLPDLVSTCSSSSSLS
QTALPCSPQTSKSSTTLHSPYLLTNLEKLEEQSQGEAPKASCSSPTPMKLCSRSQGGSSR
LESVGEDDELFVENGGSSCDVVEKPPPGRRKHSLPQQLDTAGVRQEYQIIKKSARSLSTI
QVESPWRLAQPSIISSIVLMKGQGKGLGFSIVGGQDSARGQMGIFVKTIFPHGAAAADGR
LKEGDEILEVNGESLQGLTHQQAIQTFKQLKKGVVTLTIRTRLRSPSLTPCPTPTLLSRS
SSPNSNTSGGTPVPSGLEEADGRRPGPGPKDCIIMEVTLSKESGVGLGIVVCCLTLENSA
PGIYIHSLALGSVAKMDGRLSRGDQILEVDSVSLRHAALSEAYAILSECGPGPVSLIISR
HPNPKVSEQEMDHIIARSTHRDKMSKNRHSSQSQGLSCKSPSPTMKDRQEEGSPALSWTM
KRFLEPASRESLNSEVELSQYFSQDISSHSYMSENMLMGSNSDEALHQQSCSTSIDDNST
QPHVESGPALQGKTPVPPNHHVEAVYPQVAVCSPTSVRSPLLRQRRVICFENELSDDEDS
DNAGNTSLYHRPTKCDSVDFSDAQASQISKTETSLLDIDGDSEDCGELQRCGSNDMTTQL
YSSLSEEGESFTIKSESPASESPFIPIHCPFDHNAGVTGNMGSGSSNLTISSEDNTNQDD
GQLESKRSPKLEHKAVTRVKTMMSNETPNLSQQQKPKVNEPSFFMAPSQPNSHATQCGRN
PRTVRPHQHCKKGDASDLVGVCTIDTVTLRRSKSESFGLDLEILSSPLKVVITGLKPGGA
AERESMGKLSPGDEIVTIDEKLVCSSSYQEICELMHSLPMTLSLEVKRPVSAVDRLSSLI
MSSETSDGATRLNPDTSVQRVSDEGQVISADSGNPNHTSQTDHNFHIPITNIDDILCDMS
HCSDITKYTKSPCKSCPELNLYEKDCIEVSMQFSPRECSNFDTGSEKGAILPVETFLNSS
STHVTQLKDNSSAVLNRSCSESPDAGYRCMDSIGDDANSNSDSITDSSLKFSKMASSGGS
SHEHSSDEEEVDFCLCDAQQPAAGGHSHLSQPANMSSPLQCANRQNEKLDQTFNVLQSPS
DVCLLNRQNSFRTPQCLQSLGVSSTEEPCKSSKSTITVSSIECHINSINEPFDKLKACLT
SNARSLGICSTPSSPDTHSVSYSNTTKLHTDTSLTSDLLTLLNTQTANLASLKSENSGSS
IHGSDTRVLASMIMKEKILECTTNLNPHANPLLKTSDLNLLDKSDCPVSESNFKLQDETQ
IRPNTSPHKLRGKSFQSENKLLEQPPQKPTRSKSPTNVPSTATMSSFLKTSNEPKVSERR
KDSTEHWPSVNTLQTVQLAKEKNIHLGSKTLVKSQGQSHPSAMQRTFIEVRLFSLPGSSS
PVNACNGTVNSKDSKCIQRSTDARLTPLLSPANSTVEKTSGIVNKTVFNSLCPTKETKIT
TSNSSKASTIVETSGTLTSSTSRLYIKTMERQSFSTDTALSVDYNSFSVRHKIKSFENLA
NFDKPVAKSSDSQLYTLAYRASINHRISGYMGLVNTTDWTQRRSVENLIPTTPCSPPLRK
SPSSITLINLELPNASCNTAVLTLDNAETDIKKASDGFASHTPPVLRRKHARLHNSRLRQ
LRALSMPELEKLCTEDFSKHGNAIDETEPGIHSTIPTTTVTGIVPPSATLDLNRMSPGDS
VSTEETPQGTPETHRQQPGFSISLKELVASPMSQCKLQTILSSVTNKSYVSALIQEAQAL
SEVNDNTHLVVLSKEEGSGLGFSIAGGVDLEQKAITVHRVFTKGAASLEGTIQRGDSILS
INGISLDGKTHGEAVSCLHQARPSIQALVVIWRDNDSELSLSDRQSASQPRRMCLSSKTS
LEAAAGVDVGPDGALTVELHKTSAGLGFSLEGGKSSSPQGDRPLIVKRIFKGGAAELSGL
IEVGDEVLSINGFSLEGLMHHDAWKIIKATNEGPNDLLIRKPST
NT seq
7335 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcaggacaacgcgctgggcatcctcccactgctcgaggagtggcttgtg
gctcagaccaggggatctcagcaagagtacaacctaaatcgggacacttcttgcttaaag
catgtggatcaagactcctaccaaaatggagaaggggatagtgtgtgcaatagcagcagt
gttaacagtcttaatatcaaggacatgtccctgtgtctggctgccattcagaaactggtg
gagtacatcagtttcaacttcatggagggggacacagctccatcagccagcccatcctcc
tgcagggagggcttagatgttgaggtacatgctgtttgcctcagtaaagaggaaggggat
gcagctgagtttggcctaagctttgggaacattcctatttttggggactctgatagaaga
aagaagggaggcccgaggaggaggagggaccagaaccccattatggatgtgggctgcatt
tgggtgacagaggtgagaaagaggagcgcagcgtccctctgtgggaggatcaaactgagg
gacgaactgctgtcactgaatgggcagctgatggtgggagtagatgtcagtggagccagt
tacctggctgaccagtgctggaatggaggctatatctacctgatactgctacggcgagtc
aagcgaaaggctcctctccctccctgtgatgccgatggcagagacagagctgtgtctgaa
ccgcctgacagttcagcgaactgcaaacgcacacgcaagtttggtgtcatatcacgatcc
ttcttcaaccgagacaacagagacagggacagcactgactcagaagtccagggctgttac
aatggccacaactcttcaatttccactgatgcaggagtcagtccaccaggagatgactca
ggttgcatcctatccactcatacaaccacagaggaaagcccagacaccgttcctcacatg
agaactgctcaacagcatctctacatacaaggtgctgccaccctgcctgcaatgtgtcac
agtcagctgttggaatacaaaatggattcatttagcagtgaaccttcaaaccagcctaga
gaaagcagtcacatctggaagatgcacctggtgaagggtcaggagggcctgggcatacaa
ataactggggggcgtggctccaagcgctctcctcatggcatcattatagcttatatagag
gaagggggagccatccacagggatggtcgtctccatgctggggatgagttgctgatggtt
aacggtcagtctctggtgggtctcactcatcaagaggccgttgctatcctacgctccact
actggtctggtccagctggtggtagccagcagggaggagtcagatgtgggtttccagcac
ttcccatccaccagtctgccagacctggtcagcacctgcagctcctcatcctccctatct
cagactgctctgccttgctcaccccagacctctaagagcagcaccactctgcacagcccc
tacctgttgactaatctggagaaactagaagaacaaagtcagggagaggcacccaaagca
tcctgctctagccctacacccatgaagctctgcagtcgatcccaggggggcagcagtcgc
ctggagtcagtgggtgaggatgatgagctgtttgtggagaatggtgggagcagctgtgac
gtagtggagaagcctccaccaggccgacgtaaacactccttacctcaacaactggatact
gcaggtgtgagacaggaatatcagatcataaagaaatcagctcgctccctgagcaccatt
caagtggagtcaccatggcgactggcacaaccatccattatctccagtatagtgctgatg
aaaggccagggcaagggcctaggattcagtattgttggtgggcaggactcagcacgtggt
cagatggggatttttgtcaagactattttccctcatggagctgcagcagctgatggacga
ctgaaagagggtgatgagattctggaggtgaacggcgaatctctccaaggactcacccat
caacaggccatccagaccttcaagcaactgaaaaagggtgtggtgacactgaccattcga
actcgtctgcgcagtcccagtctgacaccttgtccaacccccaccctccttagccgctct
agctcacccaactccaataccagcgggggaacaccagtcccctctgggctcgaagaagct
gatggccgcaggcccggtcctggtccaaaagactgcatcatcatggaggtcacacttagt
aaagagtctggtgttggtctggggattgtcgtttgttgtctgaccctggagaactctgct
cctggcatctacatccatagtctggcactgggatctgtggccaagatggacggcaggctc
agtcgtggagatcagatacttgaggttgactctgtcagtcttcgtcatgctgctctcagt
gaggcctacgccatcctcagtgaatgtggccctggtccggtcagtctcattataagcagg
cacccaaaccccaaagtatcagaacaggagatggatcatattatagctcgatccacacac
cgggacaaaatgagcaagaacagacattcatctcaatcccaaggcctgtcctgtaagagc
ccctccccaacaatgaaggacaggcaggaagaaggctcccctgctctcagctggaccatg
aagagattccttgagcctgccagtagagagtccctgaactcagaggtagagttatctcaa
tacttctcccaggacatttccagccactcatatatgtctgaaaacatgctaatgggctcg
aacagtgatgaggccctccaccagcagagctgcagtacttccatagatgacaactcaaca
cagccacatgtggaaagtggtcctgcattacaaggcaagacccctgtccctcctaatcat
catgtggaagcagtttacccacaggttgctgtttgtagccccacctcagtgcggagtcca
cttctgcgtcagcgacgggtgatatgctttgagaatgagctcagtgatgatgaggactct
gacaacgctggaaacacttcactctaccacaggccaacaaagtgtgactctgttgacttc
agtgatgcccaagcatcccaaatttccaaaactgaaacatcattgttagatattgatggg
gacagtgaagattgtggggaattgcagagatgtggaagcaatgatatgacaacacaactt
tatagtagtttgtcagaggaaggagagagttttaccatcaagtctgagtcacctgcttct
gagtcacccttcatacctattcactgtccctttgatcacaatgcaggggtgacaggcaat
atgggctcggggtccagtaatctgaccatcagcagtgaggacaatacaaatcaagatgat
ggacagttggagtcaaagcgctcccccaagcttgagcacaaagcagtaacacgggtcaaa
actatgatgagcaatgaaacaccaaatctgtcccagcaacaaaaacccaaagttaatgag
ccatcttttttcatggccccatcccagcccaattcccatgccacacagtgtggaagaaac
cccaggactgtccgtccccatcagcactgtaagaagggagatgccagtgatcttgtgggt
gtttgtaccattgacactgtgaccctgaggagaagtaagagcgagtcatttgggcttgac
ctagagattctgtcgtcccctctgaaagttgtcatcactgggttaaagcctggaggtgca
gcagaaagggaatctatgggaaagctttctcctggagatgagattgtaacaattgatgaa
aaactagtgtgctcctctagctaccaggaaatctgtgagctcatgcacagcctacctatg
acactgtccttggaagttaagagaccagtttcagctgtagatcgactgtccagtttgata
atgtcatcagagaccagtgatggagccacgaggctgaacccagacacatctgttcagcgg
gtatctgatgaaggacaagtaataagtgcagattcagggaatcccaatcacacatcccaa
acagaccataactttcatataccgatcaccaatatagatgatatattatgcgatatgagc
cactgcagtgatataactaagtataccaaatccccctgcaagtcatgccctgaattaaac
ctgtatgagaaagattgtattgaggtttcaatgcagttcagtcctcgagaatgttccaac
tttgacacaggaagtgaaaaaggtgccatcctccctgtggagacatttttaaacagctca
tccacacatgtgacacaactaaaggacaacagctctgcagtgctcaatagatcgtgttca
gaaagtcctgatgctgggtatagatgtatggactccataggagatgacgccaattcaaac
agtgactctatcactgacagcagtctaaagttcagtaaaatggccagtagtggtggtagt
tctcatgagcactcctcagatgaggaagaagtagacttttgtttgtgtgatgcccagcag
cctgctgctggcggacattctcatttaagtcagccagcaaacatgtcttcacctttacag
tgtgccaacagacaaaatgaaaaactggatcagacttttaatgtgttgcagagcccctct
gatgtatgcttgttaaacagacaaaactcttttagaacaccccaatgcctgcagtcatta
ggagtctcatctactgaggaaccatgcaagtcatccaaaagtacaataaccgtatcttct
atagagtgccacattaatagtattaatgaaccatttgacaaacttaaagcatgtttgaca
tccaatgccagaagcctaggcatttgcagcacgccttcatcaccagatactcacagtgtc
agttatagtaatactacaaagttgcatacagatacgtcactgacctcagatttattgacg
cttttgaatacacaaacggccaatttagcttcattgaagtcagagaactcaggttcaagc
atacacggatcagatacaagagtgttagcatcaatgataatgaaagaaaaaatcttggag
tgtacaactaatttaaacccacatgctaacccattacttaagacctccgacctaaacctc
cttgataagtcagactgtcctgtgtcagaaagtaactttaaacttcaagatgaaactcaa
atcagaccaaacactagtccccacaaactgaggggcaagagttttcagagtgagaacaaa
ctactggagcagcctccccaaaaacctaccaggagtaaaagtccaacaaacgtaccatca
acagcaaccatgtccagctttttgaagaccagcaatgagcccaaagtaagtgaaagaagg
aaagattcaactgagcactggccttcagttaacacattacaaactgtacaattggcgaag
gagaagaacatccatttaggctccaaaacattagttaaatcacagggccaatctcaccct
tccgccatgcagagaacatttatagaagttcgactgttctccttacctggctcatcatct
ccagttaatgcttgcaatgggacagtgaattcaaaagactctaaatgcattcaaagaagc
acagatgcaagattgacacctctgctttctcctgccaactcaacagtagaaaaaacaagt
ggcattgtcaataaaacagtattcaattcattgtgtcctaccaaagaaactaaaataacc
acaagtaatagctcaaaagccagtactattgtggaaacaagtgggaccctgacatccagc
acatctagactgtacataaagacaatggagagacaaagcttttccacagatactgccttg
tctgtggactacaattccttttctgtccgacataagataaagtcctttgaaaacctggct
aactttgataagcctgtggctaaaagcagtgacagtcagttgtatactctggcgtataga
gcctctattaaccataggatttctggttatatgggcttagttaatactaccgactggaca
cagcgaaggagtgtggagaatttaatccctaccacaccctgctcacctcctcttagaaaa
tctccatctagtattacactgataaaccttgagcttccaaatgcaagctgcaacacagct
gtcctaactctggacaatgctgagactgacattaaaaaagcttcagatgggtttgcatca
catacccctccggtgctgcggaggaaacatgccagacttcacaacagcaggttgcggcag
ctcagggctctcagtatgcctgaattggaaaaactatgcacagaggacttttccaaacat
ggtaatgccatagatgaaactgagcctggcatccattccactatacctacaactacagtg
actgggattgttccaccttctgcaaccctggatttaaataggatgagcccaggtgattct
gtatccactgaagaaactcctcagggaaccccagagacccatagacagcagcctggcttt
tccatcagtttaaaggaactggttgcttctcctatgagtcagtgtaaactgcaaacaatt
ctgtcttccgtgacaaataaatcatatgtgtcagccctaatccaggaagctcaagccctc
tctgaggttaacgataatactcaccttgttgtcctgagtaaagaggaaggctcagggctt
ggttttagtattgctggtggagtcgaccttgagcagaaggcaataactgttcatcgggtc
ttcaccaaaggtgcagctagcctggaaggcacaatccagagaggtgacagcattttatcc
ataaatggcataagtctggatggtaaaacccatggagaggccgtgtcttgccttcatcaa
gccagaccttccattcaggccttagtagtcatttggagagacaatgacagtgaattgagt
ctctctgacagacagtcagctagccagccaagaaggatgtgtctctccagcaagacgtct
ttggaggcagcagcaggggtggatgtgggtccagatggtgctttaacagtggagcttcac
aagacatccgctggcctgggcttcagtctagaggggggaaagtcctcaagtccccaagga
gacagacctctcattgtcaaacgcatctttaaaggaggtgctgcagagctgtctgggctc
attgaagttggcgacgaggttctgtctatcaacggcttctctctggagggcctcatgcac
catgatgcctggaaaatcatcaaagccactaatgaagggcctaatgacctcctcatccgc
aaacccagtacatga
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integrated database retrieval system
