Scomber scombrus (Atlantic mackerel): 133978765
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Entry
133978765 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133978765
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GFIT
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NCBI-GeneID:
133978765
NCBI-ProteinID:
XP_062273100
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Position
1:37652365..37683716
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AA seq
1161 aa
AA seq
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MDQCEDREEGVPPSKSSLCGEHDSQTKAQRMQQQRADSPEPSCVSMKSDWSMDRPIDIKD
GQPADGSIRMQQQRADSPEPSCVSMKSDWSMDKPIKFKDGQPADGSIRMQQQRADSPEPS
CVSMKSDRSMDPPIKFKDGQTADGRVQQQSSEVPSDQSAQQHQTQLDSIFMLLEENIVTF
VTNELKRVQRSLSQSYPECLESQNEDEEVLDGEEEEQRRSSRDAFLKITVHFLRRMKQEE
LAGRLQSRTGAAKCRRKLKSNLEKKFQCLFEGIAKAGNPTLLNQIYTPLYITEGGTAEVN
DEHEVRQIETASRKPDRPETTIRQEDIFKVSPGRDEPIRTVMTKGVAGIGKTVLTQKFTL
DWAEDKANQDIHFTFPFTFRELNVLKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIF
DGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPE
CVGMVTEVRGFTDPQKEEYFRKRFRDEEQASTIISHIKTSRSLHIMCHIPVFCWITATVL
EDVLKSRERGELPKTLTEMYIHFLVVQSKMKNIKYHGGAETDPHWSPENRKMIELLGKLA
FEQLQKGNLIFYESDLTECGIDIRAASVCSGVFTQVFKEERGLYQDKVFCFVHLSVQEFL
AALHVHLTFIKSGVNLLAEEQTTSSSSTLFYQSAVDEALKSPNGHLDLFLRFLLGLSLQT
NQTLLQGLLTQTGSSSQTNQKTVEYIKKKISENVSAERSINLFHCLNELNDRSLVEEIQQ
YLRSGSLSTDKLSPAQWSALGFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKAL
LSGCNLSERSCAALSSVLSSQSSSLRDLDLSNNNLQDSGVKLVSAGLESPHCGLETLSLS
GCLITEEGCASLASALSSNPSHLRELDLSYNHPGDSGETLLSAGLEDPHWRLDTLRMDHG
GLQRLKPGLRKYACELELDPNTMNRKLKLSDNNMKVTRVEEDQSYPYHPDRFDHWSQLLC
RNVLTGRCYWEVECRGTVDVSVTYRRISRRGGSYDCLFGRNDQSWRLRCSDDGRYSVWHN
KGETPISSSSSSSSSSSSSSSSSVSNRVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTTFT
QPLYAGFAVWSRSGSVSLCPV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaagctctctgtgtggg
gaacatgacagccagaccaaagctcagaggatgcagcagcagagagcagactctcctgaa
cccagctgtgtgtccatgaagagtgactggtctatggatcgtcctattgacattaaagat
ggacaacctgctgatggaagtatcaggatgcagcagcagagagcagactctcctgaaccc
agctgtgtgtccatgaagagtgactggtctatggataagcctattaaatttaaagatgga
caacctgctgatggaagtatcaggatgcagcagcagagagcagactctcctgaacccagc
tgtgtgtccatgaagagtgaccggtctatggatcctcctattaagtttaaagatggacaa
actgctgatggaagagttcagcagcagagctcagaggttcccagtgatcagtctgcacag
cagcatcaaacacagctggactccatatttatgctgctggaggagaacatcgtcactttt
gtgacgaacgagctgaagagagtccagaggagtctgagccaaagttacccagaatgctta
gagagtcagaatgaggatgaggaggtgttggacggtgaggaggaagagcagaggaggagc
agcagagacgcatttctgaagatcacagtgcacttcctgaggagaatgaagcaggaggag
ctggctgggcgtctccagagcagaactggtgctgcaaagtgtcgacgtaaactcaagtct
aacctggagaagaagttccagtgtctgtttgaggggatcgctaaagcaggaaacccaacc
cttctgaatcagatctacacaccgctctacatcacagagggagggactgcagaggtcaat
gatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaaaca
acaatcagacaagaagacatctttaaagtttcacctggaagagatgaaccaatcagaaca
gtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctg
gactgggctgaagacaaagccaaccaggacatacacttcacatttccattcactttcaga
gagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatcacttcttt
actgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatcttt
gacggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctgactgat
gttacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaaactgctt
ccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgag
tgtgttggcatggtgacagaggtcagagggttcactgacccacagaaggaggagtacttc
aggaagagattcagagatgaggagcaggccagcaccatcatctcccacatcaagacatca
cgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctg
gaggatgttttgaaaagcagagagagaggagagctgcccaagaccctgactgagatgtac
atccacttcctggtggttcagtccaaaatgaagaacatcaagtatcatggaggagctgag
acagatccacactggagtccagagaacaggaagatgattgagcttctgggaaaactggct
tttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggc
atcgatatcagagcagcctcagtgtgctcaggagtgttcacacaggtctttaaagaggag
agagggctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctg
gctgctcttcatgtccatctgacattcatcaagtctggagtcaatctgctggcagaagaa
caaacaacatcctcatcatcaacacttttctaccagagtgctgtggatgaggccttaaag
agtccaaatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagacc
aatcagactctcctacaaggtctgctgacacagaccggaagtagctcacagaccaatcag
aaaacagtcgagtacattaagaagaagatcagtgagaatgtgtctgcagagagaagcatc
aatctgttccactgtctgaatgaactgaatgatcgttctctagtggaggagatccaacag
tacctgagatcaggaagtctctctacagataaactgtctcctgctcagtggtcagctctg
ggcttcatcttactgtcatcagaaaaagatctggatgtgtttgacctgaagaaatactct
gcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctg
ttgagtggctgtaacctctcagagagaagctgtgcagctctgtcctcagttctcagctcc
cagtcctctagtctgagagatctggacctgagtaacaacaacctgcaggattcaggagta
aagcttgtttctgctggactggagagtccacactgtggactggaaaccctcagtctgtca
ggatgtctgatcacagaggaaggctgtgcttctctggcctcagctctgagctccaacccc
tcccatctgagagagctggacctgagctacaatcatccaggagactcaggagagacgctt
ctgtctgctggactggaggatccacactggagactggacactctcaggatggaccatggt
ggactgcagagactgaaacctggtctgaggaagtatgcctgtgaactggaactggatcca
aacacaatgaacagaaaactcaaactgtctgacaacaacatgaaggtgacacgtgtggag
gaggatcagtcatatccttatcatccagacagatttgatcactggtctcagctgctgtgt
agaaatgttctgactggtcgatgttactgggaggtcgagtgtagaggaacagttgatgta
tcagtgacttacagaagaatcagcaggagaggaggcagttatgactgtttgtttgggagg
aatgatcagtcctggagactgaggtgctctgatgatggtcgttactctgtttggcacaat
aagggagaaacacccatctcctcctcctcctcctcctcctcctcatcctcctcctcctcc
tcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggcactctgtcc
ttctacagagtctcctctgacacactgatccacctccacaccttcaacaccacattcact
caacctctgtatgctgggtttgcagtctggtccaggtctggttcagtgtctctatgtcct
gtgtag
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integrated database retrieval system
