Scomber scombrus (Atlantic mackerel): 133978773
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Entry
133978773 CDS
T10651
Name
(RefSeq) vesicle-associated membrane protein 8-like
KO
K08512
vesicle-associated membrane protein 8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04130
SNARE interactions in vesicular transport
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133978773
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133978773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133978773
Membrane trafficking [BR:
ssco04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
133978773
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
DUF1129
Myelin_PLP
LRRC37AB_C
RIFIN
RNF152_C
Tweety
Motif
Other DBs
NCBI-GeneID:
133978773
NCBI-ProteinID:
XP_062273070
LinkDB
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Position
4:complement(2170524..2173955)
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AA seq
130 aa
AA seq
DB search
MRQDGETETETEMEQRGVAAEPVPQTKMQTLNVQLDEVKDEMIVTVDKMLIGLEKVDELV
MKTGEMEKAAQIFERTGKKVARFYWWKNVKLVVLVVVVVLIIVLVIVLLATGVIPTSSPV
RPIVTPTSKP
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagacaagacggagagacagagacagagacagagatggagcagcgaggagtggcagca
gagccagtgccgcaaaccaagatgcaaaccttaaatgttcagttagatgaagtaaaagac
gagatgatagtcactgtggacaaaatgttgatcggattggaaaaggtggacgaactcgtc
atgaagacaggagaaatggaaaaagcggctcagatatttgagaggaccggtaagaaagtg
gctcgcttctactggtggaagaacgtcaagctggtcgtattggtcgttgtggtcgtcctc
atcatcgtcctcgtcatcgtcctgctggctaccggagtcatccccaccagttccccagtg
cgtcctatagtcactcccacctccaagccataa
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