Scomber scombrus (Atlantic mackerel): 133978821
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Entry
133978821 CDS
T10651
Symbol
neff1
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133978821 (neff1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133978821 (neff1)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133978821 (neff1)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
133978821 (neff1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Fib_alpha
ANG-1
DUF1664
DUF2594
TolA_bind_tri
DUF6402
Motif
Other DBs
NCBI-GeneID:
133978821
NCBI-ProteinID:
XP_062273141
LinkDB
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Position
4:complement(6238958..6243353)
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AA seq
526 aa
AA seq
DB search
MSYSGDIYSGSSSYRRIFGEAPRSGRFGVGSSSSPSRLQPAGYRSSSSHRTYGSPSGVTS
TTYRRTAAAPGRGLSSMQESMMDLTQSTAVTNEMKIIRTNEKEQLQGLNDRFVSFIEKVH
NLEQQNKVLEAEVTLLRQRHNEPSRLHELYEQEIRELRGRVEELTHEKSQMHMDCVQMND
TVERVREKLEEESKLREEAENTLKGYRKDVDDATLARLELEKKVEALLDEIAFLRKVHEE
ELQELQTSLQASQVSVEMDMSKPDLAAALKDIRAQYENLSCRNQAQAEEWYRSKFANVTE
SAARNQDAIKHSKEELSEYRRQVQARTLEIESLRGHNEALERQIAEMEDHHNNEIGEMQD
TIQQLEAALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSSVSGAMVQ
SGYPSFSYMSSRSYGLGSYRKSSVKQEEEEEVEEEEKEEEEEGEENEEEGEEAEEGDEGD
DGDEQEEGEGEGEEEEEEEEEEEEKPKEKDEKEKKKEGPAVKSSKS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccggcgacatttacagcggcagcagctcctatcggaggatcttcggagag
gccccccggtccggacgctttggagtgggcagcagcagcagcccttcccgccttcagcct
gcgggataccgcagcagcagcagccaccgcacctatggttccccctccggtgtcacctcc
accacctaccgcaggaccgcggcggcgcccggtcgcgggctctcctccatgcaggagtcc
atgatggacctgacccagtccaccgcggtcaccaacgagatgaagatcatccgcaccaac
gagaaggagcagctgcagggcctcaacgaccgcttcgtgtccttcattgagaaagtccac
aacttggagcagcagaacaaagtcctggaggcggaggtcactctgctgcgccagcgccac
aatgagccgtcccgcctgcacgagctgtacgagcaggagatccgcgagctgcggggacgc
gttgaagagctgacccacgagaagagccagatgcacatggactgcgtgcagatgaacgac
acggtggagcgcgtgcgggagaagctggaagaggagagcaagctgcgcgaagaggccgag
aacaccctgaagggctaccgtaaggacgtggacgacgccaccctggcgcgcctggagctg
gagaagaaagttgaggcactgctggatgagatcgccttcctcaggaaagttcacgaggag
gagctgcaggagctgcagacgtcactgcaggcctctcaggtgtcagtggagatggatatg
agcaaaccggatctggccgcagccctgaaggacatcagggcccagtatgagaacctgtca
tgcaggaaccaggcccaggcagaggagtggtaccgctccaagtttgccaacgtgaccgag
tccgccgcccgcaaccaggacgccatcaagcattccaaggaggagctgagcgagtaccgc
aggcaggtgcaggcccgcactttggagattgagtctctcaggggccacaatgaggccctg
gagaggcagattgctgagatggaggatcaccataacaatgaaattggagagatgcaggat
accatccagcagctggaggccgccctgcgcagcactaaaggagagatgtcccgtcacctg
cgtgaataccaggacctgctgaatgttaagatggcgctggatattgagattgccgcctac
aggaaactgctggaaggcgaggagtgccgcctcagctccgtgagcggcgccatggtccag
tccggctaccccagcttctcctacatgtcatcccgtagctacggcctcggctcctacagg
aagtccagcgtcaagcaggaggaggaagaggaggtggaagaagaggagaaggaagaagaa
gaggagggagaggagaacgaggaggagggagaggaggcagaagagggagatgagggagat
gatggagacgagcaggaggaaggcgagggtgagggagaagaggaggaggaagaggaagag
gaggaagaggagaagcccaaagagaaggatgagaaggagaagaagaaggagggccccgcc
gtgaagagcagcaagagctaa
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