Scomber scombrus (Atlantic mackerel): 133978827
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Entry
133978827 CDS
T10651
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00514
Other types of O-glycan biosynthesis
ssco00515
Mannose type O-glycan biosynthesis
ssco01100
Metabolic pathways
Module
ssco_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
133978827 (pomt1)
00514 Other types of O-glycan biosynthesis
133978827 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
133978827 (pomt1)
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
133978827 (pomt1)
Glycosyltransferases [BR:
ssco01003
]
O-Glycan biosynthesis
O-linked Man type
133978827 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
PMT_2
PARG_cat_N
CP_ATPgrasp_2
Motif
Other DBs
NCBI-GeneID:
133978827
NCBI-ProteinID:
XP_062273146
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Position
4:complement(34263480..34272599)
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AA seq
717 aa
AA seq
DB search
MLPLVVTAQVDLVLLLVSVLAVWTRLSRLSYPNAVVFDEVYYGQFVSLYMKRVFFIDDSG
PPLGHMILAFGAYLGGFDGNFVWNRIGAEYPSSVSVWSLRLLPALCGALCVPLVYLLTLE
LHFSHLSALLASLLLLLENALIVQSRFMLLESVLIFFVLLAFFSYLRFHNAANSSSFRYG
WLLLCGVSCGAAVGVKYMGVFSYLLLLGVASLHTWKLIGERAVSHLSVCVQCVCRAVCLL
VVPVLLYVFWFYVHLSLLNRSGPHDQLMSSAFQASLEGGLSRITQGQPLEVSYGSQVTLR
SSASQPIPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDVNNWWIIKEPGRQQLMVSS
PPQPVRHGDVIQLVHGMTSRFLNSHDVAAPMSPHAQEVSGYVDFNVSMPTQNLWRVHIFN
REAESEVWKTILSEVRLVHVNTSAVLRMSGVSLPDWGFRQLEVVAEKLFKAHSSSLGWTV
EEHRYGTSQEQKEREVELHSPTHIDVDRKISFWSKFVELQSKMLTVKHEDSEHKYSSSPL
EWVAMETNIAYWLHSSTNAQIHLIGNPVSWGVANLSLLAYQLLAAVYLLRRRRGFKDLPD
AAWARFLSLGCVCVGGWLVNFVPFLLMEKTLFLYHYLPALCYLYLLSPALLEHIHTHLLS
SETHRRAFCVCVSAMLVSVFLSYQTFCPLTYGSPELSANQLQGLKWRNSWDILYRRR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgctccccctggtggtgacggcccaggtggacctggtcctgctgcttgtctccgtcctc
gctgtctggacccgactgagccgactcagctaccccaacgctgtggtgtttgatgaggtg
tactatggacagttcgtgtctctctacatgaagagagttttcttcatcgatgacagcggc
ccgcccctcggtcacatgatcctggccttcggagcgtacctgggaggatttgatgggaac
ttcgtgtggaacagaattggagcagagtaccccagcagtgtgagcgtgtggagtctgcgg
ctgcttcctgctctgtgtggagctctctgcgttcctctcgtctacctgctgactctggag
cttcacttctctcacctgtcggctctgttagcgtctctgctgctgctgctggagaacgct
ctgatcgtccaatcacgtttcatgttactggagtcagttctcatcttcttcgtgctcctg
gcgttcttctcctacctgcgcttccacaacgccgccaacagctcctccttcagatacggc
tggctgctcctctgtggagtctcctgcggcgcagctgtcggggtgaagtatatgggcgtg
ttctcctacctgctgctgctgggcgtggcctcgctgcacacctggaagctgattggagag
cgagctgtcagtcatctgagtgtgtgtgtgcagtgtgtgtgtcgagctgtgtgtctctta
gttgttccggttctgctctacgtgttctggttctacgttcacctgagtctcctgaaccgc
agcggaccacatgaccaactgatgagctccgccttccaggccagtctggagggcggcctc
tccaggatcactcagggtcagcctctggaagtgtcttatggcagtcaggtgactctaaga
agctccgcctcccagccaatcccctgctggctccactcacacaaagccaactacccaatc
aggtatgagaatgggcggggcagctctcaccagcagcaggtcacatgttacccgttcaaa
gacgtcaacaactggtggatcatcaaggagccgggcaggcagcagctgatggtcagctct
cctccgcagccggtccgtcatggtgatgtcatccagctggttcatgggatgacatcacgc
ttcctgaacagccatgatgtagcagctcctatgagtcctcacgctcaggaggtttcaggt
tacgtggactttaacgtctccatgccgacccagaacctgtggagagtgcatatcttcaac
agggaggcggagtcagaggtgtggaagacgattctgtctgaggttcgattggttcacgtc
aacacgtcagctgttctaaggatgagtggtgtgtctcttccagactggggtttccgtcag
ctggaggttgtagcagagaagttgtttaaggctcacagcagcagtctgggctggacggtg
gaggagcatcgctatgggaccagtcaggagcagaaggagagggaggtggagcttcactct
ccgactcacatcgatgtggacaggaagatttccttctggtccaagtttgtggagcttcag
tcgaagatgctgacggtgaaacacgaagactctgagcacaaatacagctcgtcccccttg
gagtgggttgccatggagaccaacatcgcatactggctgcactcctccaccaacgctcag
atccatctgattggtaacccagtgtcgtggggcgtggccaacctcagcctgctggcctat
cagctgctggcagccgtctacctgctgaggaggaggcggggcttcaaagacctacctgac
gctgcctgggctcggttcctctctctcgggtgtgtgtgtgttggtggctggttggtgaac
tttgttccgttcctcctgatggagaaaactctcttcctgtatcactacctgccggctctc
tgctacctttacctgctgagccctgcactgctggagcacatccacacacacctgctcagc
agtgagacacaccggcgtgcgttctgcgtatgcgtgtcggccatgttggtttctgtcttc
ctgtcctatcagactttctgccctttgacctacggcagcccggagctgtcggccaatcag
ctgcaaggactgaagtggaggaactcctgggacatcctgtaccgccgccgctag
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