Scomber scombrus (Atlantic mackerel): 133978894
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Entry
133978894 CDS
T10651
Name
(RefSeq) tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Cilium and associated proteins [BR:
ssco03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
133978894
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133978894
NCBI-ProteinID:
XP_062273228
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All DBs
Position
4:10760198..10878821
Genome browser
AA seq
2358 aa
AA seq
DB search
MMKWQPRKKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRES
LEPTYQQLQKMKLDKSPFVVVSVIGQELLTASHHTASVVVLEAALKIGTCSLKLRGSVFS
ALSSAHWSLGNTEKSTGYMQQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHR
NQLVLAMKLKDREAASMALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELG
NMGAVYIAMGDFENAVQCHEQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHT
HVLELAQELEEKSIEMRAYAGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASS
NLGIIHQMKGDYETALKLHKTHLAIAQELSDYAAQGRAYGNMGNAYNALGAFDQAVRYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALG
NLGNFHCSRGEFPQAVPYYEQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALGDFAKAEECQKYLLSLAQSLNNAQARFRALG
NLGDIFVCKKDVAGAIQFYEQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHT
QELEVYQELGDVPGECKAHGHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYG
NMGITKMNVGVMEEAIGYLEQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIK
YYDQYLSVAQSLNRMQDQEKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQ
AYGELGALHSQLGNYEQAISCLERQLAIARDTQDRLLEGDASCGLGVVYQSMGEYETALR
CHQSDLEIAEETGSPARQARAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTL
AYGSLGRTHHALQNYSQAVMYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQH
QLYRASALFETIRHEAQHSTDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQQDSDPYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGIL
KFHEVYLGEGLSEGGSEFQEGGGGGLTSGSSLEQHIASAREALGVESYYSRGCSSSETES
EAGDLLDQQFEELNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSS
LPRRSSNLGKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGS
SSNEYLYERFSLIAVPSINGLGSNAKAHSRRPGPVPCGGVSMAAVVGNPRLPSPVMDRWL
WGPMSSAEEEAHMVAELLGCQPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTP
NPEGVPGGASRKGSIGSGYTIPESLHMQDDSSDVESICDSPSLQEFLLTAADILDLRLPV
KLVVLGSYLESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKVFVHAFYTALLN
GTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPDRA
RDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSAGTG
IPAAVFFPTADPGDRLQHCSTTLQSLLGLPPPALQALCKLITASEAGEQLINRAVKNMVA
MLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKT
GKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPMPMGYSSLPFS
SHCLDNQASDAISVYSLSSVASSMSFVSKSDCDFLSHRQRGGATAHYSAHKHPHVPRSRS
SPHGAAAAVAGARGEEEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVVGGSGT
GAGRGYSVSVSSRGSVSTPTSPVKTCVVPSPNSPFQKVGKVSSSDTGESDQSSTETDSTV
KSQEEKTVTLDPQELAQKILEETQSHLRAVGSLQRAGAEGGTAGGTSARSSAFRSSETSA
FSRPNSSASGRAQSSPRPKPPSRSSSLQKISSGYNSPAVSESSQKEGSHPSPTLDSHAQF
KLKYPSSPYSGHISRSPSNVSPSSGHQSPSGSAPSPALSYSSTGSACSTSADASDLDRLR
RGVIDEKVQAIHNLKTFWANAAAQQQQGHLGPVRAVHSASGQLGSASRDVLSLLNLSPRH
CSPNDTQDSLELRELGLQSLDRGSKNSSNGHHCSNPRKVAPSPTISTSSSPGARSIRLPS
GNGYKFLSPGRFFPSSKC
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatggcagccccggaagaaggcatacttccgacagggtgttgcccttcagtac
cttggtcgccatgccgacgcactggccgccttcgcctccgggctggcccaagaccccaaa
agtctacagctactggtgggcatggtagaagctgccatgaagtcacctttacgagagtct
ttagagcccacctatcaacagctgcaaaagatgaagctggacaaaagtccctttgtggtg
gtgtccgtgattggccaggagctgctgacagccagccaccacacagcctctgttgtggtg
ttggaagcagctttgaagatcggcacatgcagcctcaagctccgtggctccgtcttctcg
gccctcagcagcgcccactggtccctgggcaacaccgagaagagcaccggctacatgcag
caagacttggaggtggccaagaccttaggtgaccaaacaggggaatgccgcgcgcatggg
aatttaggctcggcattcttctccaagggaaactaccgtgaagcattgaccaaccatcga
aaccagctggttctggccatgaaacttaaggacagagaggctgcttcaatggccctgagc
agcttgggccatgtatacacagccataggagactatccaaatgccctggccagccacaag
cagtgtgtcctgctggccaagcagtccaaggatcagctatctgaggctcgcgagctggga
aacatgggggctgtctacatcgctatgggagactttgaaaatgctgtccaatgccacgag
cagcacctgggcattgccaaggccctggaaaataaacgagaggaggctcgggcgtatagt
aacctcggtagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccatact
catgttctggagctcgcccaggagctggaggaaaaatccatcgagatgagagcctacgca
ggtctgggtcacgctgcccgctgcatgcaggacttggagagggccaagcagtaccatgaa
cagcagctgtcgatagctgagggcttgaaggacagggccgcagaaggaagagcctcttcc
aatctgggcatcatccaccagatgaagggggactatgaaactgcactgaaactccacaaa
acacacttggccattgctcaggagctcagtgactatgctgctcagggccgggcctatggg
aacatgggtaatgcctacaatgccctaggagcttttgaccaggctgtccgctaccaccgc
caagagctgcagatttccatggaggtcaatgaccgggcctcacaagcctccacacatggc
aacttggctgtggcttaccaagccctgggagctcatgaccgcgctttgcagcattaccag
aaccacctcaacattgctcgtgagctcagagatgtccagagcgaggctcgggctctgggc
aaccttggcaacttccactgctctcgaggagaattccctcaggctgtgccctactatgag
cagtacctccgcctgtcccctgacctccaagacatggagagtgaggggaaagtttgtcac
aatcttggttatgcccactactgcttgggcaactaccaggatgccgtcaaatactatgag
caggacttggctctggccaaggacctccatgacaaactgagtcaggccaaggcgtactgt
aaccttggtctggcattcaaggccctgggagactttgctaaggcagaggagtgtcagaaa
tatctgctttcactggcccagtccctgaacaatgcacaggctcgcttcagagctcttggg
aacctgggggacatatttgtctgtaaaaaggatgtggctggagccattcaattttatgag
cagcaactggccttagctcaccaggttaaggagcgtaggatggaggcctgtgcctatgct
gcccttggggccacctacaggcttgtgcagaaatatgacaaggctctgggctaccacact
caggagctagaggtatatcaagagctgggtgatgtgccaggagagtgcaaagcccacggt
cacttggcagcagtctacatggccctggggaaatacgccatggccttcaagagctatgaa
gagcaattggaactagggcggaggctaaaggatcctgtcgtggaggctcaggtgtatgga
aatatgggcatcacaaaaatgaatgtgggggtgatggaggaagctattggttacttggaa
cagcagctggccactttacagcagctgagtggcaatgaggcagtaatggacaggggtagg
gcctatggaaacctgggagactgttatgaggcgctgggagactttgaggaagccatcaag
tactatgaccagtatctgtcagtggcccagagcctcaaccgcatgcaggaccaggagaag
gcatacagaggcttaggcaatggacacagggccatgggaaacctacagcaatcgctggtg
tgttttgagaagcggttagtagtggctcatgagcttggggagtgtggaggcaaggctcag
gcttatggtgaattgggtgcacttcacagccagctgggcaattatgagcaggccatctcc
tgtctggagcgtcagttggccattgcccgtgacacccaggacagactactggagggagat
gccagctgcggtttgggtgttgtataccaatctatgggagagtatgagacagccctgcga
tgccaccaaagtgatctggagattgcagaggaaacgggaagccccgcacgccaggcccgg
gcctacggaaacttaggccttacctacgagtcgctaggaaactacgagcgggcggttgtc
ttccaagaacagcacctaagtgtggcggctcagactaatgacttggctgccaagacactg
gcctatggcagcctggggagaacacaccacgcactgcaaaactactcacaggctgtcatg
tacctgcaggaaggcctgcggcttgctgagcagctggctcggcgtgaggacgaggcgaag
atccgccatcgtctggggctttctctgtgggccagtgggaatctggaggaggcccaacat
cagttataccgggcatctgcactgtttgagaccatccggcatgaagcccaacacagcacc
gactataaactctccctatttgacctgcaaacctcctgctaccaggctctccaaagggtt
cttgtcagcctgggccaccatgatgaggctctggcagtggcagagcggggtcgtacacga
gccttcgctgacctcttagtggagaggcagacaggccagcaggactcagacccctacact
ccagtaactgttgagcacatcttggacaccgtcaacagccagagggccttggtactttat
ttctccatggctgctggttacctgtacagctggctgctggctccaggagcaggcatcctg
aagttccatgaggtgtacctgggcgaggggttgtcagaaggagggtcagagttccaggag
ggaggtggaggtgggctgaccagcggctcctcgttggagcagcacattgccagcgctcgc
gaggctctgggagtcgaatcctattacagcagagggtgttcgagcagtgagacagagagt
gaggcaggagatttgttggaccaacaatttgaggagctcaacaacaagcttaactctgtc
accgatccaacaggcttcctgcgcatggtgtccagaaacaacctgttcaacaggagttgc
cagagtatgaccagtctgttcagtaacaccatgtctcctgccaaagatggtaactcttcc
ctgcctcgtcgctccagcaacctcggcaagcctccactccgggcactttatgatttgctc
attgcacctatggaggggggcttgatgcactccagtgggcctgtgggcagacacagacag
ctggtgatggtgctagaaggagaactgtacctcatccccttcgccctgcttaaaggaagc
tcttcgaatgaatacctgtatgagcgcttcagcctcatagctgttccctccatcaacggc
cttggatctaatgcaaaggctcattcccggcgccctggaccagttccatgtggtggtgtc
tcgatggcagcagtggtggggaaccctagactgccctcacctgtgatggaccgctggctt
tggggacccatgtcctctgcagaggaggaagctcatatggtggctgaactactgggctgc
caacccctggctggctcttctgcaactaaggaaagggtcatgagtgccctcacacaagct
gagtgtgcccactttgccacccacatttcctggaaattggcggctctggtgctcacccca
aacccagagggggtacccggtggggcaagcaggaagggttcaattggaagcggctacacc
atcccagagtctctccacatgcaggatgacagcagtgacgtggagagcatctgtgacagt
ccatccctacaggagttcctgctcacagctgcagatatattggacctgaggttacctgtc
aagctggtggttctgggctcatacctggagtccagcagcaaggtgacagcagatggtgtc
gtgggattgaccagagcctttctggctgctggcgcccagtgtgttctggtgtccttgtgg
cctgtccctgttgcagcctccaaggtttttgtccatgccttctacactgctcttcttaat
gggaccaaggctagtgcagccctggcagatgccatgaaaactgtccagagtagcaagcag
tactcacacccttccaactgggcaggatacatgctgattggcaatgatgtgaagcttaac
agcccatcttcactgatcgggcaagctttggcagagattcttcagtatccagatcgagca
cgtgatgctctgagagttttactccacctggtggagaagtctcttcagagaatacagaac
ggtcagcgtaactccatgtacacatcccagcagagtgtggagaacaaggtggggggagtc
cctggctggcaggcccttttgacggctgtgggcttccgacttgactctgcaggcaccggt
attcctgctgctgtcttctttcctactgctgacccaggagacaggctacaacactgcagc
accactttacagtcactactgggtctgccgccgccagctctccaggctttgtgcaaactc
atcacagcttcagaggcaggagagcagctcatcaaccgggctgttaaaaatatggtggca
atgctccaccaggtactagtccaactccagacaggagagaaagaacaggacttctccctg
ctgcccattcaggtgtccattagtgtgcagctatggagactgccgggatgccacgaattt
ctggctgctctaggttttgacttatgtgaggtaggccaagaagaagtggtgctgaaaaca
ggcaagctggccaaccgccgcaccttgcactttgctctgcagtctctgctggcgctgttt
gactccacagaactgcctaagcgtctgagcctggatagctcatcttcccttgagtctcta
gcttcagcccagtctgtgtccaaccccatgcccatgggatactcaagccttcccttctct
tctcattgcctggacaatcaggcatcagatgccatctctgtctatagcctcagctctgtg
gcctcttccatgagctttgtttccaagtcagattgtgatttcctcagccatcggcagcgc
ggtggagccacagcacactactctgcccacaagcaccctcacgttccccgtagtcgctcc
tctcctcatggggcagctgctgcagtggcaggagcccgaggtgaggaggaggaatacgag
ggtttttctatcatcagcagtgagccgctgggaagccactgtgactctttgcctctgcca
ccaggccacagccagcgccaccaccgtggaggcaggggggttgttggtggatctggcaca
ggtgcaggaagaggctacagtgtatcagtatcatcaagaggcagtgtcagcacccccacc
tcccctgtcaaaacatgtgtggtgcccagtccaaactcaccattccagaaggtgggtaag
gtgagcagctcagatacaggtgaatcagaccagtccagtactgagacagacagcactgtc
aagtctcaggaagaaaaaactgtcactctggatcctcaagagctagcccagaagatttta
gaggagactcagagccatctgcgggcagtgggtagtcttcagcgggccggggcagagggt
gggacagcaggaggaacctcagctcggagcagcgccttccgctcatctgaaactagtgca
ttcagccgtcctaacagcagtgctagtggtcgagctcagtcttccccaagacccaaacct
ccctctcgttcttcttcactgcagaagataagctctggctacaatagtcctgctgtctct
gagtcttcccaaaaggagggcagccacccttcacccactctggacagccacgcacagttc
aaattgaagtacccaagttccccatacagtggccacatctctcgctcccctagtaatgtg
tctcccagttctggtcaccagtccccgtctggtagtgctccatctcctgccctatcatac
tcctccacaggctctgcctgttctacatcggctgatgcttcagacttggaccgtttaaga
agaggggtcattgatgagaaagtccaagctatccacaatctgaagaccttttgggctaat
gctgcagcccagcaacagcaaggacatctaggtcctgtcagagctgtccacagtgcttct
ggacaactgggttctgccagtagggatgtattgagccttctgaacctctccccacgccat
tgctcccctaatgacacccaagacagcctggagctgcgggagctggggctgcagtcactg
gacaggggcagcaagaactcttccaatggacaccactgctccaaccccaggaaagtggct
ccatcacctacaatttccacaagcagtagccctggtgctcgttctatccgactaccttct
ggcaatggatacaagttcctgtcgcctggaagatttttcccttcctctaaatgctga
DBGET
integrated database retrieval system
