Scomber scombrus (Atlantic mackerel): 133978898
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Entry
133978898 CDS
T10651
Symbol
poli
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133978898 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133978898 (poli)
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133978898 (poli)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
133978898 (poli)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_C
IMS_HHH_1
Cdd1
IMS_HHH
RecR_HhH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
133978898
NCBI-ProteinID:
XP_062273232
LinkDB
All DBs
Position
4:27196514..27201887
Genome browser
AA seq
746 aa
AA seq
DB search
MDNSEDDMEDDETEWKSSFTDSAPPSSATTTAAAAGSNLSKIPTPAHRVIVHFDLDCFYA
QVEMIRNPALRDVPLGIQQKNIIVTCNYVAREQGLTKLMSITDAMEKCPQMVMVKGEDLT
HYREMSYKVTELLLSYCPLVERLGFDENYMDITEIVETRLAQTLESNSYSFKGHVYNHFS
AETKAADHPRLALGSYIAAELREVIHSKLGLTGCAGVATNKLLAKLVSGTFKPNQQTTLL
PENVSDIMGCLSSLRKLPGVGHQTTKRLQALGLVSLKDLQQFPLTDLVREFGGPSAQRLK
NLVLGVDDSPVTPTGAPQSLSDEDSFKKISSTKGVLEKIQELLNSLVGRMHKDGRQPQTF
RLTVRKYSATNKWFSRESRQCPIPNHIGQKITSGSSDDAVAQLVPLAMKLFHKVVDTSAA
FHLTLLNVCFSNLQTRGPAASGKGSITSFFSHSTSPTKTQILSSQSQDDSSRSGDSHHTD
HRFSTHSMITQHTSQKTVSTKSPSSSEAALRGFKKKQSTVVPREEPQLRKVTCSTVGSDP
DDTNNTVTHRLPPNVDPEVFRLLPEEIQKELLSPAYANSLTSSLMATSSLSASVTVTDMP
QISENTSLQCLPPSTLVPQSLSESQNVTDRKEAVNRFVPSDRATTVNNQRPRDTSSASVE
NMMEEGRLSFPQSSDCEFPVNVDPEVFSELPPSVQRELMSEWKQQKLVLKIPALRKPGKS
LMTKDKKEKAGKSSQANNLLNYFKPS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggataacagcgaggatgacatggaagatgatgaaaccgagtggaagagcagtttcacg
gactctgcaccacccagctctgctactactactgctgctgctgctgggtcaaacctcagt
aagataccaacacctgcacacagagtgattgtgcattttgacctggactgcttctatgct
caggtggaaatgatcagaaacccagcactaagagatgtccctttaggtattcagcagaag
aacatcatagtcacttgtaactatgtggcgagagagcaaggcctcaccaagttgatgtct
attactgatgcgatggagaaatgtcctcagatggtgatggttaaaggagaagacctgaca
cactacagagaaatgtcctataaagtgacagagctgctgctgtcctactgtccgttggta
gagaggcttggatttgatgagaactacatggacatcacagagatagtagagacgaggctg
gcacagactctggagtctaacagctattcatttaaaggacatgtctacaaccatttcagt
gcagaaactaaagccgcagaccacccgaggctggctttaggttcatacattgcagcagag
ctgagagaagtcatccacagcaaactgggcctgactggctgtgctggcgtcgccactaat
aagctattagccaaactggtgtcaggcactttcaaacccaaccagcaaaccacactgctg
ccggagaacgtcagtgacatcatgggctgcctaagcagcctccgcaaattaccaggggtg
ggacaccaaaccactaagagacttcaggccctgggattagtcagcttgaaagacctacag
cagttcccattgactgacttggtgagagagtttggaggccccagtgcgcagcgcctgaag
aatctggtcctcggtgttgatgactctcctgtcacccctactggggcccctcagtctctc
agtgatgaagactcctttaagaagatctcatcaactaaaggtgtgttggagaagattcaa
gagctcctgaacagcctggtggggaggatgcacaaagacggcaggcagcctcaaaccttc
cggcttaccgttcgtaaatactcagcgaccaacaagtggttcagtcgggagagccggcag
tgtccaatccctaaccacatcggacagaagatcacgtctggcagcagtgatgatgctgtg
gcccagctggtcccattggccatgaagcttttccacaaggtggtggacaccagcgcagcc
tttcacctcaccctccttaacgtgtgcttcagtaacctgcagaccagaggacctgccgcc
agcggaaagggctcaataacatctttcttttcgcacagcacgtctccaacaaaaacacaa
atcctctcatcgcaaagccaggacgattcctctcggagcggggatagccaccacacggat
catcggtttagcacccacagcatgattactcaacatacctcacaaaagacagtctccaca
aaaagcccctctagctctgaggcagcattacgtgggttcaaaaaaaaacagagcaccgtt
gttcccagagaagagcctcagcttcggaaagtaacctgcagcactgtggggtcagaccct
gatgacacaaataacactgtgacacatagactgcccccaaatgttgatccggaagtgttc
aggcttctccccgaggaaatccagaaggagctgttatctcctgcctacgcaaactcccta
accagctctctcatggctactagcagcctgtccgcctctgttacagtcactgatatgccc
caaatatcagagaacacctctctgcagtgccttccaccctccacacttgtcccacagtca
ttatcagaatcacaaaatgtcacagacagaaaagaagctgtgaacagatttgttccatct
gacagagcgaccaccgtgaacaaccagaggcctcgggacacaagttcagctagcgtagaa
aacatgatggaagaagggagactctcattccctcagtcttctgactgtgagttcccggta
aatgtggaccctgaggtgttttctgagctcccgccgtctgttcagagagagttgatgtct
gaatggaagcaacagaagttggtcctgaagatccccgcattgaggaaaccagggaaaagc
ttgatgaccaaagacaaaaaagaaaaagcaggaaaaagcagtcaggcaaacaatttgttg
aattatttcaaacccagttag
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