Scomber scombrus (Atlantic mackerel): 133978915
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Entry
133978915 CDS
T10651
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133978915 (tfip11)
Spliceosome [BR:
ssco03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
133978915 (tfip11)
Other components
Complex C specific factors
133978915 (tfip11)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
133978915
NCBI-ProteinID:
XP_062273253
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Position
4:complement(15211083..15216028)
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AA seq
839 aa
AA seq
DB search
MSMSHLYGRRGEEEEEGVEIESFEVTEWDLANEFNPDRRRHRQTKDQATYGIWADRDSDE
DERPSFGGKRSKDYSAPVSFVSAGLRKSAAEEKQQQQQPQQKGEGGSDDSDDDAPSAPPP
PRGGAPKKLQMSNFRGNQSQRFAGGIQSGQGIGNWEKHTKGIGQKLLQKMGYQPGKGLGK
NAQGIINPIEAKIRKGKGAVGAYGNERTKQSLQDFPVVDSEEEEEKEFQKELGQWRKDPA
GSAGKKKPKYSYRTVDELKAKGKLAGRSTPASAGELAQVKVIDMTGREQKVYYSYSQMSN
KHSVPDEGPPSMATRDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLT
HESRALQSRLEVEQDAIQRMEAVLALVDRFPSGETAPGEGPTLQECARIFETLQTDYYEE
YKMMGLADLAVAVIHPLLKEKLRSWDPLKDSSYCLEDIGQWRAILESRDLHSSAQDSNMD
PYHRVLWEVLIPVMRSCVSGWQPRIVGPMVDCVEVWAPLLPQWILDHLLEQLVLPRLQRE
VDNWNPLTDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPSDTSARLILQPW
KDVFTLGAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLLD
KNFFTKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDVLLSQPLIKEKFNEALDIMNRAV
SSGMGGYMQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGISAGVPTNFKDLIQ
TKAEENNIVFMPIVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcacacttgtatgggcgaagaggagaggaggaagaggaaggtgtagaaatt
gagagctttgaggtgacagaatgggatctggccaatgagttcaacccagaccgccgcaga
cacaggcagaccaaggaccaagctacctatggcatctgggctgacagggactcagatgag
gacgagaggcccagctttggaggcaagagatctaaagattactctgctccggtgagcttt
gtgagtgctggcctaagaaagagtgcagctgaggagaaacaacaacagcaacagccgcag
caaaaaggagaaggcggctctgatgactccgatgatgatgctccttcagcccctccacct
ccacgtggaggtgcacccaaaaaactccagatgagtaatttccgtgggaaccagtcacag
aggtttgcaggtggcatacagtctggacaaggcattggaaactgggagaagcacactaag
ggaattggacaaaaactgctgcaaaagatgggttaccaaccaggcaaaggcctggggaag
aatgctcaaggtattataaaccctattgaggcaaagattcgtaaaggcaagggagcagtg
ggagcttatggcaatgaacgaaccaagcagagtcttcaggactttcctgtggtcgactca
gaagaagaggaggaaaaggagtttcagaaggagctaggtcagtggcgtaaggatcctgct
ggctctgcaggaaagaagaaacccaagtactcttacagaactgtagacgagctgaaggct
aaaggcaagctggcagggcggagtacaccagcatctgctggagagttggcacaggtcaag
gtaatagatatgactggaagagagcaaaaggtgtattacagttacagtcagatgtccaat
aagcacagtgtcccagacgaaggtccaccgagcatggccacacgtgatcagaagggatct
ggctttgctctccctgaactggaacataatctgcagctactgatagacctcacagaacag
gacatattacagtctgccagacgcctgcagcacgaaaaagatgtagttgtgtcgctgaca
cacgagtcacgagcactgcagagcagactggaggtagagcaggatgccattcagagaatg
gaggctgtgttggcattggtggatcggtttccatctggggagacagcaccaggggaggga
cccaccctgcaggagtgcgcccggatctttgagactttacaaacagactattatgaagaa
tataagatgatgggattggcagacctggccgtagctgttattcatccgttacttaaagag
aaattacgttcctgggatcctctgaaggacagctcttattgtctggaagacatcggtcag
tggagagcaatcctcgaatctagagacctccactccagtgcccaagattcaaatatggac
ccttaccacagggtgctgtgggaagtgttgatcccagtcatgcggtcctgtgtgtcaggc
tggcagcctcgtattgttgggccaatggtggactgtgtggaagtatgggcccctcttctc
ccccagtggatcctggatcatctactggagcagctggttttaccccgtttgcagcgagag
gtggataactggaatcctttaacagacacagtgcccatccactcctggatccacccttgg
ctgcctctgctccaatcacgtctagagcctctttacccgcccatcaggagcaaactgtca
aatgctttgcagcgctggcatcccagcgacacctcggcacgcctcattttgcagccgtgg
aaagacgttttcacactaggagcatgggaggccttcatggtgaaaaacatcatccctaaa
ctagctttgtgtctggaggagctggttattaaccctcaccagcagcagatggagcccttt
cactgggtgatggactgggagggaatgctgtctccctccagccttgtgtccctgctggac
aaaaacttctttacaaagtggttgcaagtcctgtgttcatggttaagcaacagtcctaac
tatgaggaaatcactaaatggtacctcggttggaaaagcatgttcagtgatgtcttgttg
tcacaaccgctcataaaagagaagtttaatgaagcattggacatcatgaaccgtgctgtg
tcttcaggcatggggggatatatgcaacctggtgcaagggagaatattgcatatctcaca
cagacagagagacgaaaggacttccagtacgaggcaatgcaggagcgtagggatgctgag
agtgtagctcataggggcatcagtgctggtgtgccgacaaacttcaaagatctcatccag
acaaaggcagaggagaacaacatcgtctttatgcccatcgtggccaaacggcatgagggt
aaacagctgtacacgtttgggcgtattgtcatctacatagacagaggagttgtgtttgtg
cagggagaaaagacttgggtacccacgtctctgcagagtctgatagacatggccaagtga
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