Scomber scombrus (Atlantic mackerel): 133978931
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Entry
133978931 CDS
T10651
Symbol
lrp3
Name
(RefSeq) low-density lipoprotein receptor-related protein 3
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133978931 (lrp3)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
133978931 (lrp3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
133978931
NCBI-ProteinID:
XP_062273279
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Position
1:7395953..7403181
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AA seq
835 aa
AA seq
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MGLTELLLGLLWLRSALLGAAGCSERVEVHTERRGVIYSPSWPLNYPPGVNCSWHIQAGQ
GEVITISFRNFDVAESRHCLGDWLLLTPTWSGESRLCGSMLPPPFISTRGRVWLYFHTQA
NSSSQAQGFRLSYIRGHLGQSSCQSDEFLCGNGKCLPHSWKCNGQDECGDATDERNCSPP
PTEARPGLCPFGSLPCTEAQSTRCLPASLRCNGAPDCPDGTDELGCPDTTCGKRLGNFYG
SFASPDFFRANRSAAMEMRCSWLLDTQDPKPIVLQLDLQLGPRDTLHVYDGLLQRAEHLL
QVLSYHNNRRPALLESSRGQMSVLYMAQPHSPGHGFNATYQVKGYCFPGERPCGSDQGCY
SERQRCDGYWHCPSGRDEEACPTCPDGEFPCEGSTGVCYPASERCNNQKRCPDGSDEKNC
YDCQPGNFHCGTNLCIFETWRCDGQEDCLDGSDERDCMAAVPRKVITAALIGSLVCSLLL
VIALGCALKLHSLRSREYRAFETQMTRMEADFVQREAPPSYGQLIAQGLIPPVEDFPVYN
PTQASVLQNLRLAMRRQIRRHSTRRSTSSSSRRRLEHLWSRLFHSEGRARGHVPLLDPPA
PTQITLGLHSYRTVGEQGPQARARSGADFGDEVDVLGMQGCCSATMDLQPCMSESPASPL
SYQSLDSPEDEELSPVCRERRRAPQFEPPTPDQTDSSTHSQPSTPQEASVTMCHPRASRK
LVLELAVNLKGVSLRRYTPLGPLSPISPPVFPSSSQTPTTQPHTQGLEGTSPTEPSSSSV
QAEDSDSHCTVEVPSREIKSRGKNIEERRREGKSRLYRFSRTLSDEGGDSGRAST
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgggactgacggagctgctgctcgggctgctgtggctccgctccgctctgctcggtgca
gcaggctgcagtgagcgggtggaggtccatacagagcggaggggtgtgatctacagccca
tcctggcctttaaactaccctcctggagtcaactgtagctggcatatccaggcaggccag
ggagaggtcattaccatcagtttccgcaactttgatgtggcggagtctagacattgtttg
ggagactggctcctgcttacacccacatggagcggggaatccaggctttgtggctccatg
ctgcctcctcccttcatctccaccagggggcgtgtttggctttactttcacactcaggcc
aacagctccagtcaagcccagggcttccgcctttcctacatcagaggtcacctgggtcag
agcagctgtcagtcagatgagttcctctgtgggaacgggaagtgtctccctcactcctgg
aaatgcaacggtcaggatgaatgcggcgatgctacagacgaacgcaactgctccccccct
cccaccgaggcccggcctggcctctgccctttcggctcccttccgtgcaccgaggctcag
tccacccgctgtcttcccgcctctctgcgctgcaacggagctccggactgtcccgatggc
accgatgagctgggttgccctgacaccacctgcggcaaacggctggggaacttttacggc
tcctttgcttctccggattttttccgggctaatcggagcgctgcgatggagatgaggtgt
tcctggttgctggacacccaggaccccaagcccatcgttctgcagctggacctgcagcta
gggcccagagacacactgcatgtgtacgacggcctgctgcagcgagcggagcacctctta
caggtgttgtcctatcataacaaccgacgtccggcgttgctagagtcaagccgaggacag
atgagtgtgttgtacatggcacagcctcacagccctggccatggatttaatgccacatac
caggtcaaaggctactgttttcccggcgagcgtccctgcggcagtgatcagggctgctac
tctgaacggcaacgctgcgacggctactggcactgcccatccggccgcgatgaggaggcc
tgtccgacgtgcccggacggggagttcccctgcgagggcagcacaggagtgtgctaccca
gcctctgagcgctgcaacaaccagaagaggtgcccggatggttcggacgagaagaactgc
tatgactgccaacctggaaacttccactgtgggactaacttgtgcatctttgagacatgg
cggtgtgacggccaggaggactgcttagacgggagtgatgagagggactgcatggcagcg
gtgcccaggaaagtgattacagccgctctgattggcagcctggtctgcagcctcctgctg
gtcatcgccctcggctgtgccctcaaactccattccctcaggagtagagagtacagagct
tttgaaactcaaatgactcgcatggaggcagattttgttcagcgagaggccccgccctct
tacggtcagctgattgcccagggtctcatccctcctgtggaggatttcccagtgtacaac
cccacacaggcctctgttttacagaacctgcggttggctatgcgcagacagatcagacgt
cactcaacacggcgttcaacctcctcttcctcacgtcggcgtctcgagcatctgtggagt
cggctgttccacagtgaggggcgagccagaggtcatgtccctctgcttgacccccctgct
cccacacagatcaccctagggctccacagctatcgaacagtgggggagcaggggcctcag
gccagggccaggtctggagctgattttggggatgaggtcgatgtgttgggtatgcagggc
tgctgctcagctaccatggacctgcagccttgtatgtcagagagccctgcgtctcctctc
tcctaccagtcactggacagtccagaggacgaggaactgtcacctgtctgcagggaaagg
agaagggctccacagttcgagccccccactcctgatcagactgactcttcaacccacagc
caaccttccaccccccaggaagcctctgtaaccatgtgccacccccgggcatctagaaaa
ctggtactggagctggcagttaacctgaagggtgtttccctgagacgttacacccccttg
gggcctctatcacctatctcaccccctgtgtttcctagcagttcccagacacctacgacc
caacctcatacccaggggctggaggggacttcacctacagaaccctcatcttcctctgtg
caagcagaggacagtgacagccactgtacagtggaagtgccaagcagggaaataaaaagc
aggggaaaaaatatagaagagaggaggagagagggcaagagtaggctgtacaggttcagc
aggaccctcagtgacgagggaggagattcagggagggcctccacatag
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