Scomber scombrus (Atlantic mackerel): 133978948
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Entry
133978948 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133978948
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133978948
NCBI-ProteinID:
XP_062273334
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Position
1:36936692..36967773
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AA seq
1096 aa
AA seq
DB search
MKSDWSIGRFDDFKDEQPADGRVQQQSSEVHSYQSAQQHQTQLDSIFMLLEENIVTFVKK
ALKRLQKGLRPDYPECLESQSEDEDVLDDEEEELRRSSREALLKITVHFLRRMKQEELAE
RLQSKCRHKLKRNLKKKFQCLFEGIAKAGNPTLLNEIYTPLYITEGGTAEVNDEHEVTQI
ETASWKPDRPETTIRQEEIFKASPGRDEPIRKVMTKGVAGIGKTVLTQKFTLDWAEGKAN
QDILFIFPFTFRELNVLKEKKYSLVELVHLFFTETKEAGICRFEEFQVVFIFDGLDECRL
PLDFHNNEILTDVTESTSVDVLLTNLIRGKLIPSARLWITTRPAAANQIPPECVSMVTDV
RGFTDPQKEEYFRNRFTDKKQASTIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSRE
RGELPKTLTEMYIHFLVVQAKLKNIKYDGGAETDPHWSPESRKMIESLGKLAFEQLQKGN
LIFYELDLKECGIDIRAASVCSGVFTQVFKNERGLYHDKVFCFVHLSVQEFLAALHVHLT
FIKSGVNLLEENPMSTSQKSGTTEEKSAMTHFYHTAVDNALQSPNGHLDLFLRFLLGLSL
QTNQILLQGLLTQTGSSSQINEKTGRYIKKIIMETSSPEKNINLFHCLSELRDHSLVEVI
QQYLRSGSLTTKKLSPAQWSALVYILLSSEKDLKVFDLKKYSASEEALLRLLPVVKASNK
ALLSGCNLSDRGCEALSSILSSQSSNLKELDLSNNSLQDSAVTQLSAGLNSPHCTLKTLR
LIGCNLSGRSCEVLASVLSSQFSSLRELDVSNNDLHDSGVKLLSAGLESPHCGLKTLWLS
GCLITKEGCASLASALSSNPSHLKELDLSYNHPGDSGVQLLNQDPHLKLATLKVDHGGVQ
RLRPGIRKYACELELDPNTVNGKLKLSDNNRKVTHVEEVQSYPDHPDRFDRWPQLLCGNV
LTGRCYWEVERRGRLSVSVSYRGISRKGGRDDCWFGRNDQSWSLYCSEDGVYCVWHNKTG
ISMSSSSSSSSSSSSFSSSVSDRVGVYLDCPAGTLSFYRVSSDTLTHLHTFKTTFTQPLN
AGFAVRSGSSLSLCDL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgactggtctattggtcgctttgatgactttaaagatgaacaacctgctgat
ggaagagttcagcagcagagctcagaggttcacagttatcagtctgcacagcagcatcaa
acacagctggactccatatttatgctgctggaggagaacattgtcacttttgtgaagaaa
gcgttgaagagactgcagaaaggtctgagaccagattacccagaatgcttagagagtcag
agtgaggatgaggatgtgttggacgatgaggaggaagagctgaggaggagcagcagagag
gcattgctgaagatcacagtgcacttcctgaggagaatgaagcaggaggagctggctgag
cgtctgcagagcaagtgtcgacataaactcaagcgtaacctgaagaagaagttccagtgt
ctgtttgaggggatcgctaaagcaggaaacccaacccttctgaatgagatctacacaccg
ctctacatcacagagggagggactgcagaggtcaatgatgaacatgaggtcacacagatt
gaaacagcatcctggaaaccagacagaccagaaacaacaatcagacaagaagaaatcttt
aaagcctcacctggaagagatgaaccaatcagaaaagtgatgacaaagggagtggctggc
attgggaaaacagtcttaacacagaagttcactctggactgggctgaaggcaaagccaac
caggacatattgttcatatttccattcactttcagagagctgaatgtgctgaaagagaaa
aagtacagcttagtggaacttgttcacctcttctttactgaaaccaaagaagcaggaatc
tgcaggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgactt
cctctggacttccacaacaatgagatcctgactgatgttacagagtccacctcagtggat
gtgctgctgacaaacctcatcagggggaaactgattccctctgctcgcctctggataacc
acacgaccggcagcagccaatcagatccctcctgagtgtgtcagcatggtgacagatgtc
agagggttcactgacccacagaaggaggagtacttcaggaatagattcacagacaagaag
caggccagcaccatcatctcccacatcaagacatcccgaagcctccacatcatgtgccac
atcccagtcttctgctggatcactgctacagttctggaggatgtgttgaaaagcagagag
agaggagagctgcccaagaccctgactgagatgtacatccacttcctggtggttcaagcc
aaactgaagaacatcaagtatgatgggggagctgagacagatccacactggagtccagag
agcaggaagatgattgagtctctgggaaaactggcttttgagcagctgcagaaaggcaac
ctgatcttctatgaattagacctgaaagagtgtggcatcgatatcagagcagcctcagtt
tgctcaggagtgttcacacaggtctttaaaaatgagagagggctgtaccatgacaaggtg
ttctgcttcgtccatctgagtgtccaggagtttctggctgctcttcatgtccatctgaca
ttcatcaagtctggagtcaatctactggaagaaaatccaatgtcgacctcacagaagtca
ggaacaacagaagagaaatctgccatgacacatttctaccacactgctgtggacaatgcc
ttacagagtccaaatggacatctggatttgttcctccgcttcctcctgggtctttcactg
cagaccaatcagattctcctacaaggcctgttgacacagacaggaagtagctcacagatt
aatgaaaaaacaggcaggtacatcaagaagataattatggagacttcctctccagagaag
aacatcaatcttttccactgtctgagtgagctaagagatcattctctggtggaggtaatt
caacagtacctgagatcgggaagtctcactacaaaaaagctgtctcctgctcagtggtca
gctctggtctacatcttgttgtcatcagaaaaagatctgaaagtgtttgacctgaagaaa
tactctgcttcagaggaagctttgctgaggctgctaccagtggtcaaagcttctaataaa
gctttgttgagtggctgtaacctgtcagacagaggctgtgaagctctgtcctcaattctc
agttctcagtcatccaatctgaaagagcttgacttgagtaacaacagtctgcaggactct
gcagtaacacaactctctgctggactgaatagtccacactgtacactgaaaactctcagg
ctgattggctgtaacctgtcaggaagaagttgtgaagtcttggcctcagttctcagttcc
cagttctctagtctgagagagttggatgtcagtaacaacgatctgcacgattcaggcgtg
aagctgttgtctgctggattggagagtccacattgtggactgaaaactctctggttgtca
ggatgtctgatcacaaaggaaggctgtgcttctctggcctcagccctgagctccaacccc
tcccatctgaaggagctggacctgagctacaatcatccaggagactcaggagtgcagctg
ctgaaccaggatccacacttgaaactggccactctcaaggtggaccatgggggagtgcag
aggctgagacctggcataagaaagtatgcctgtgaactggaactggatccaaacacagta
aacggaaaactaaaactgtctgacaacaacaggaaggtgacacacgtggaggaggttcag
tcatatcctgatcatccagacagatttgatcgctggcctcagctgctgtgtggaaacgtt
ctgactggtcgctgttactgggaggtcgagagaagaggaagactttctgtatcagtgagc
tacagaggaatcagcaggaaaggaggcagagatgactgttggtttggaaggaatgatcag
tcctggagtctgtactgctctgaggatggtgtttactgtgtctggcacaataagacagga
atatcaatgtcctcctcctcctcctcctcctcctcttcttcctccttctcctcctctgtc
tctgacagagtaggagtgtatctggactgtcctgctggcactctgtccttctacagagtc
tcctctgacacactgacccacctccacaccttcaaaaccacattcactcagcccctgaat
gctgggtttgcagtcaggtctggttcctcattgtctctgtgtgatctgtag
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