Scomber scombrus (Atlantic mackerel): 133978984
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Entry
133978984 CDS
T10651
Symbol
scarf2
Name
(RefSeq) scavenger receptor class F member 2
KO
K24319
scavenger receptor class F member 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133978984 (scarf2)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
133978984 (scarf2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_Teneurin
EGF_2
EGF_STAB1-2
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
133978984
NCBI-ProteinID:
XP_062273360
LinkDB
All DBs
Position
4:complement(26269292..26287799)
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AA seq
949 aa
AA seq
DB search
MEVKNSFAVVAVVCLFFCSCVSQELTPKGRNVCKASGSSGLVCCSGWGQLGDECLTPLCE
GNFTCKENEVCVRPNECRCRHGYFGASCDTKCPAQFWGPDCKGKCNCYPNGQCDDLTGEC
TCNHNRWGPNCENACLCQKGKCDQETGKCTCHPGVWGPQCNNNCYCSINSVCDAMTGRCQ
CNPGWTGRNCAIQCNCNNSPCDQFTGRCQCRERLWGPRCERYCQCIHGKCNQADGSCTCT
PGYRGKFCREPCPAGFYGQNCRNRCGHCKGQQPCKVTEGRCITCDRGWNGTRCDQLCSKG
FFGENCQEVCPTCKDGHHCDPIHGKCSHCNPGWIGDRCEVRCPNGTYGENCENNCSHCYN
GICHVVTGECLCDPGFYGIYCNMTCQPGQYGVNCNKTCSCRDKNCDPMSGDCYLQRNQRM
GVIAAGSLVSFLLIVLFSLLCCCCLCRHKDDHNKKAKRILCGRFSRISTKLPRIPLRRQK
LPKVVVAHHDPENTFNCSFIEPPSVAEQPSPSSWSSQESFSSFESGDEGPVYCVPHEESV
NESKEKCCPSPATDKPEANHYEDDAGEYTSLKDTSITKPEGSEQPLLKSSDSEGSTSGSE
STTAALYARIARLSKQSKEDESSSKDGDSTPTPEAKRNGKPPPSPGKPKPRPPDPSTKPK
VSWIHGNTTGSLQPEQQGQGGMKALAVPKEKKRSSSDGSAKSEERQKMKEKSREQQKKQE
GKEADVNGSPSKHKPLRGKKSGDEHSGPSHMEHINGVVQNALKKISNFHSSSSEKKSADS
PKETAKEPPKSPKVIHPHMNSEAATLLAAQLKEKTQSINRNEGTGLTKTNGLSTPKGNRE
KPTPPQKAKRTPSTGLSQQGSTKPLLPTSSSLQKMVTPVAIDLGTPDMKSPEKQDLNGSR
AGDPKLDPTPKKTPIKKPPRKKGKEGTLDTSEIKTPQQKTAIMPPQIVK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaagaactcttttgctgttgttgcggtggtttgtctctttttttgctcctgc
gtcagccaagaactcactcctaaaggcagaaatgtatgcaaggcatctggatcatcagga
ttggtgtgctgcagtggatgggggcagctaggggatgaatgcttgacacctctctgtgaa
ggcaacttcacctgcaaggaaaatgaggtgtgtgtcaggccaaatgaatgccgctgtcgt
catggatactttggagctagctgtgacactaagtgccctgcccagttctggggccctgac
tgcaagggtaaatgtaattgctaccccaacggccaatgcgatgacttgaccggcgaatgt
acctgtaatcacaatcgttggggacctaactgcgagaatgcatgcttatgccaaaagggc
aaatgtgaccaagagactggcaaatgtacatgccaccctggcgtctggggtccccagtgc
aacaacaactgctactgcagcatcaactcggtgtgcgatgcgatgacaggacgttgccag
tgcaaccccggctggacaggaaggaactgtgcaatccagtgcaactgtaacaattcacca
tgtgaccagttcacgggacgctgccaatgccgggagaggctgtggggcccgaggtgtgaa
cgatactgccagtgcatccatggcaaatgcaaccaggcggacggctcgtgtacctgcaca
ccagggtaccgtgggaagttttgcagggagccgtgtcctgccggattctatggtcaaaac
tgcaggaacaggtgtggccactgcaaaggccagcagccctgcaaggtgacagagggacgc
tgcataacctgcgacagaggctggaatgggacacgctgtgatcagctatgctccaagggc
ttttttggggaaaactgccaggaagtgtgtcccacctgtaaagacggtcatcattgcgac
cccattcatggcaagtgctcacattgtaaccctggctggattggagacaggtgcgaggtg
cgctgccccaacggcacgtatggcgaaaactgtgagaacaactgcagtcactgttataat
ggcatctgtcatgttgtcaccggagagtgcctgtgtgacccgggattttatggaatctac
tgcaatatgacctgtcaacctgggcaatatggagttaactgcaacaaaacctgctcttgc
cgtgacaagaactgtgatcctatgtctggtgactgctatctccagcgcaaccaacggatg
ggtgtgatcgcggctggatccctggtctcctttttactgattgtcctcttctcgctgctg
tgctgctgctgcctgtgtcgacacaaagatgaccacaacaaaaaagccaagcggatcctg
tgtggacgtttcagccgaatcagcactaaacttccccgtattccactgaggcgacagaaa
ctgcccaaagtagtcgtagcccaccacgacccagagaacaccttcaactgcagcttcatc
gagcccccttcagtggctgagcagccctccccctcctcctggtcgtcccaggagtctttc
tcttcctttgagagtggagacgaggggccagtttactgtgtgccccatgaagaatctgtg
aatgaaagcaaggagaagtgctgccccagcccagcaacagacaagccagaagctaaccat
tatgaggacgatgcaggagagtacacctccctcaaagacaccagcattacaaaaccagag
ggcagcgagcagcccctgctgaagtcatcagatagtgaaggctccaccagtggctctgag
tccactacagcggccctctatgcccgcatcgcccgcctctccaagcagtccaaggaggat
gaaagcagcagcaaagatggggatagcactcctaccccagaggccaagcgcaatggaaag
ccaccaccatcacctggcaagcccaaaccacgcccaccagacccatccactaagcccaaa
gtgtcatggatccatgggaatactacagggtctctccagccagagcagcaggggcagggg
ggaatgaaagcacttgcagttccaaaagagaaaaagaggagttccagtgatggatcagcc
aagagtgaggaacggcagaaaatgaaggaaaagagccgtgagcaacagaagaaacaggag
ggtaaggaggcagacgtcaatggctcccccagcaagcacaaacctctgcgaggcaagaag
tctggggatgagcacagcggtcccagtcacatggagcacattaatggtgtggttcaaaat
gccctaaagaagattagtaacttccacagttcctcatctgagaagaagagtgctgacagt
ccaaaggagaccgccaaggagccacccaagagccctaaggtcatccatcctcatatgaac
tctgaggctgccacactcctggctgctcagctcaaggagaaaacccaaagcattaacagg
aacgaggggacaggcctgacaaagaccaatggtctatcaacacctaagggaaaccgggag
aagcccacacctccacagaaagccaagaggaccccctccactggcttgagccagcagggc
tccaccaagcccctgctgcccacctcaagcagcctccagaagatggtgacgcctgtcgcc
attgacctcgggacccctgacatgaagagcccggagaagcaggacttgaacggctcaagg
gcaggggacccaaagttggatcctacaccaaagaagactcccataaaaaaaccaccaagg
aagaaaggcaaggagggtactttggatacctcggaaattaaaacgccccagcaaaagacg
gccattatgccaccacagatagtgaaataa
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