Scomber scombrus (Atlantic mackerel): 133978992
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Entry
133978992 CDS
T10651
Symbol
arvcfb
Name
(RefSeq) ARVCF delta catenin family member b isoform X1
KO
K28154
splicing regulator ARVCF
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133978992 (arvcfb)
Spliceosome [BR:
ssco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133978992 (arvcfb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
133978992
NCBI-ProteinID:
XP_062273371
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Position
4:complement(7019101..7151735)
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AA seq
887 aa
AA seq
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MPAEVKQEQSPSNATSLAMMQEPQEMVEETVTIEEDPGTPTSHVSVVTSDDGTTRRTETK
DMSTNVKVTKMVKTVTTRTVRQVPLGPDGLPLPEGSSPLGNYTDSIDRRYLKNGGDRFIT
PQATSTLTRSYNNSYNDSYGETPESQYVRHYGLHDGYADLTDNYGSLSRGVNFRPPRYPY
LPNSYRPENSYTLPIRKDDYGHVAQPQVPMGSSTVDLNRSQPERFQAEPYGLEDDRRSLG
PEEEEPYELEPDYSTANRRTLQGANRGRTHREPLRDGPRVRAYPDDPIEAEMIDERHPYI
HGMYSAPLAQPERGSMASLDRMGGRRSPSIDSIRKDPRWRDPDLPEVIAMLGHPIDPVKS
NAAAYLQHLCYENDKIKKDVRQLKGIPVLVGLLDHPKSEVHRKACGALRNISYGKDNDNK
VAIKNCDGIPALVRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTMTNEVIIP
HSGWEHEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECEGLVDALLHALQS
AVGKKDMDNKSVENCVCIMRNLSYHVHKEVPGAEKFQDPSAPQAPGSAGPQRKKKDDAGC
FGGKKAKGRKNGENDKNYDTLDLPKRTEPSKGFELLYQPEVVRLYLSLLTESQNYNTLEA
AAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELLRSDSDKVVRAVAIALRNLSIDRRN
KDLIGSYAMRDLVSNLPSGQQRPAKNLEEDTVVAILNTIHEIVTDSSENARSLIQAQAIE
KLVAINRTSQSARETKAASHVLQTVWSYKELRNALTKDGWNKSHFQPTVTTTPKATKNGK
PGYDDTTLPLMEKNQDGYSTIDQRDKECKYKTADSSVDLTEREPLKA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaagtgaaacaggagcagagccccagtaacgccacatccctggccatgatg
caggagccgcaggagatggtggaggagacggtcaccatagaggaggaccccggaacaccc
acctcccacgtctcggtggtcacctctgacgacggcaccacacggcgcacagaaaccaag
gatatgtcaactaacgtgaaggtcactaagatggtgaagacggtgaccacacggacagtg
cgacaggtgcccctcggccccgatggcttgcccctgcctgaaggttcctctccactgggc
aactacaccgactccatcgacaggcgctatttgaagaacggaggcgaccgcttcatcacg
ccccaagcgacctccaccctgacacgctcctacaacaactcctacaatgattcctacggc
gagacacccgagagccagtacgtccgccactacggtctgcacgatggctacgccgatctg
acggacaactacggcagcctgtcgcgcggcgtcaacttccgaccgccacgctacccctac
ctgcccaacagctaccgacctgagaacagctacacgctgccaatccgcaaggatgactat
ggccatgtggcccagccccaggtgcctatgggtagcagcactgtggatctgaaccgctcc
cagccagagcgcttccaggctgagccatatggcctagaggatgaccgccgcagcttgggc
cccgaagaggaggagccctatgagctggagcccgactactccactgccaaccgtcgcacc
ctacagggggctaaccggggtcgcacccaccgggagccccttcgtgacggaccccgagtc
agagcgtacccagatgaccccattgaggcagagatgatcgatgagcgccacccttacatc
cacggcatgtattcagcgcccctggcacagccggagaggggaagcatggccagtctcgac
cgcatgggcggccggcgctcgccctccattgacagcatccgcaaggacccgcgctggcgt
gacccagaccttcccgaagtcatcgccatgttgggccacccaatcgaccccgtcaagtcc
aacgccgccgcctacctgcagcacctgtgctacgaaaacgacaaaatcaagaaggatgtg
cgtcagctgaaggggattcctgttctggtggggctcctggaccaccccaaatctgaagtc
caccgcaaggcttgtggtgccctgcgcaacatctcctacggcaaggacaatgacaacaag
gtggccatcaagaactgtgacggcatcccggccctcgtccgcctgctgaggaagaccaat
gacatggaggttcgagagctcatcaccggaactctgtggaacctgtcgtcctacgaaccc
ctgaagatggtgatcatcaaccacggcctgcaaaccatgaccaacgaggtcattatcccc
cactcggggtgggagcatgagccaaatgaggactccaagccccgtgacgctgagtggacc
accgttttcaagaacacctccggctgcctgagaaatgtgagctcagatggggcagaggct
cggcgcagactgagggaatgtgagggactggtggatgccctgctgcacgctcttcaatca
gctgtagggaagaaagatatggacaataagtctgtggagaactgtgtctgcattatgagg
aacctgtcctaccacgtccacaaagaggtccccggggccgaaaagttccaggatccatca
gcgccacaggcccccggctcagcagggccacaaaggaagaagaaagatgatgctggctgc
ttcggaggcaagaaggccaaaggcagaaaaaacggtgagaacgacaaaaactacgacaca
ttggatctgcccaagcgcacagagccgtcaaaaggctttgagctgctgtatcagccggaa
gtggtgaggctctacctatctctgctgacggagagccagaactacaacaccctggaggcc
gctgctggggctctgcaaaacctcagcgctggacagtggacctggtcaaactacatccga
gccacagtgcgtaaggagaaaggtcttcccatcctggtggagctgctgcgttctgactct
gacaaggtggtccgagctgtggccatcgccctgcgcaacctctccatcgaccgccgcaac
aaggacctgattggaagttacgctatgcgggacttggtcagtaaccttcccagcggccag
cagcggccagccaagaacctggaggaggacactgtggtcgccatcctcaacaccatccat
gagattgtcacagacagctctgaaaacgcccgctccctcatccaggcccaggccatcgag
aagctggtcgccatcaacaggaccagccaatcagctcgagaaacaaaggcagcatcccac
gtgctgcagacggtgtggagttataaagagctgaggaacgccttgacaaaggacggctgg
aacaaaagccacttccagcccacagtgaccacaacccctaaagcaaccaagaacggcaag
cctggctacgacgacaccactctacccctgatggagaagaaccaagatggttactccacc
attgaccagagggacaaagagtgcaaatacaagacagctgacagctcagtggacctgaca
gaacgggagccattaaaggcttaa
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