KEGG   Scomber scombrus (Atlantic mackerel): 133979005
Entry
133979005         CDS       T10651                                 
Symbol
unga
Name
(RefSeq) uracil DNA glycosylase a isoform X1
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133979005 (unga)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssco03400]
    133979005 (unga)
Enzymes [BR:ssco01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     133979005 (unga)
DNA repair and recombination proteins [BR:ssco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     133979005 (unga)
 Prokaryotic type
     133979005 (unga)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 133979005
NCBI-ProteinID: XP_062273387
LinkDB
Position
4:complement(15797803..15801509)
AA seq 301 aa
MFLLRCPRFLKPVSHSVARFSPVLYFAQYTKIVQKKPKSSAVEPEPRSPPTAPLSPEQLD
RIASNKRAALERLASAQTPPGFGESWRKGLSAEFGKPYFKTLIDFVAGERKRHTVYPPAE
HVFTWTQMCDVKDVKVVILGQDPYHGPNQAHGLCFSVKRPVRPPPSLENMYKELVSDIEG
FQHPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVHWLSNNLEGLVFM
LWGSYAQKKGAAIDRKRHHVLQAVHPSPLSAHRGFFGCRHFSKANELLKKSGNSPVNWKA
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtttctactgcgctgtccacgctttctaaagccagtttcacactcagttgctcgcttc
tcacctgttttatattttgctcaatacactaaaattgtgcagaagaagccgaagtcctcg
gcggtggagccagagccacgcagcccgcctacggctcctctgtccccggagcagctggac
aggatcgccagcaacaagagagccgcgttggagaggctcgcttccgctcagacgcctcct
ggtttcggggagagctggagaaaaggactgtccgctgagtttggaaagccgtatttcaaa
acgctgattgattttgttgctggagagaggaaacgccacacagtgtacccacctgctgaa
catgtcttcacatggacccagatgtgtgacgtcaaagatgtcaaagtggtgattcttggc
caggatccgtatcatggtcctaaccaagcacatggattgtgcttcagtgtcaaaagacca
gtgcgtcccccacccagtttggagaacatgtacaaagaactggtctcagacattgaaggt
tttcagcaccctggacatggagatctgaccggatgggccaaacaaggtgtgttactgctc
aacgctgtgctgacagttcgagcgcaccaggccaactcccacaaagacaaaggctgggag
accttcacagacgctgtcgtgcattggctcagcaacaacctggaaggcctcgtcttcatg
ctatggggatcatatgctcagaagaaaggtgctgcaattgataggaaacgccaccacgtc
ctgcaggctgtgcatccttctcctttgtcagctcatcgtgggttctttgggtgcaggcat
ttctcaaaggcaaatgagctgctaaagaaatctggaaactctcctgtgaactggaaggca
ctttaa

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