Scomber scombrus (Atlantic mackerel): 133979029
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Entry
133979029 CDS
T10651
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133979029 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133979029 (nipbla)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
133979029 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
HEAT_EZ
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
133979029
NCBI-ProteinID:
XP_062273420
LinkDB
All DBs
Position
4:complement(17924704..17952192)
Genome browser
AA seq
2539 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVTCLLGCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKTDVMQQPMVQ
QYKITQNSMHSPAQSANFQPTAISPNPSSRFVAPQTGSSSRYMGQQNSPVPSPYTPQSPA
TGYIQQYPHQQPPSYNQHQQIQQVSVASPMVPGSIRNIHEGKVSGQMANAANHHSDRHGT
EDYLNIVHRLGNEEGDSTMRNPPFPLRSPQSGCSPAGSEGTPKTGSRPPLILQSPPPYAP
SPREGGPDQKQQLQQRKKTPAVKEEKDMYDIVSSPNKDSSKLTLKLSRVKSNESDTPGEV
VPGMDQNSDNIEAELGFQQVPVLQQNLARLQQGSLAGGASGLQPPSSPYDEAELDALAEI
ERIEREAASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGSTGGGNAGKL
TPQEATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPASGPAAV
EGSDTALRLKPDGRPEVIKNRVDKHDSRRDGRESSKHRHDEKSSDRRGDMPKSSNRGEPG
RDRDRDSDRDRRHRSETGGRDRRSPDARCRSDRDRSGFRASSTGEPGRSSHRQDGSKPAS
SASGAKLPDSFPAQLLGGHSGALKNFQIPKIKRDKDGSGSNESQMWCQPKVKLERLGLVQ
DFEKRPKPVVVLKKLSVDQIQRIIRHSKSGKNRLSSGKSSKSGMDPAVLKELPPELLAEI
ESTMPLCERVKMNKRKRSTVNEKPKYAEVSSDEDANGESARKRQRRDKDRSWDMEERERR
GSGEHRKSGQRDGRRGSGSRYRDSSEEDSPPPSMSEVARKMKMKEKQKKRKAYEPKLTHE
ELMDSSTFKRFLASIDNILENLEDVDFTAMAADDDEIPEEFLLGKHQLNELGSESAKIKA
MGISSRIPADKLVKLLNILEKNIQDGSKLSTLMNHDHDAEDEEKLWRDLIMERVTKSADA
CLTALNIMTSLHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVGPHGGGLLSSKA
KRAKCSTHKQRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSEL
QLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPMYIQMV
TALVLQLIQCVVHLPNDKDVFDEYDSKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQ
GEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYL
GTVAARLRKDAVTSKMDQRSIDRILQESPGSDETQQLQKALLDYLEENAETDASLVFARK
FYIAQWFRDATTEAEKSMRNQNPKDEDSSDGPQHAKEMETTGEIMQRAEKRKKFLRNIIK
TMPAHFATLKMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKA
MKCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDM
LIERILDTGISVRKRVIKILRDICLEQPTFTKITEMCVRMIRRVNDEEGIKKLVNETFQK
LWFTPTPAHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKACV
QLVDNLVEHILKYEESLAENKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTK
CNTANDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGA
VVNKVTHNYKFVWACFNRFYGALNKLKIQHQEDPNSTTLVANKPFLLRSLFTVGALARHF
DFDLEEFKGTNKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFMPEVKT
LYNGILADASSSINLKIQILKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISSGM
SSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSM
RNKADQQLVEIDKKYTGFIHMKAVAGMKMSYNLQQAIEMSRKTIIRGFRQDETHSALCSH
LFSMIRGNRQHRRAFLISLLNLFDDSSKTEVNMLLFIADNLACFPYQSQEEPLFIMHHID
ICLSVSGSNLLQTFKELLLKEPRRKEKKPKWKHTSDGEDEEEKMNCDSPRSNEDENGNSD
DDVVRRPKKARKPVEDSESSESDLEDLKVDDAEKVMRLLPDNPSGLLDFANAVQGILLLL
VLKQHLKNQYGFSDGKIQKYSPTESAKVYDKAVNRKSNVSFHPRQSIDFISNNLAHATLT
GDVKRRIVKQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAINALLGGMGPISGPSPRN
QAGPETDDDYSDGDERTPGSSRRSRRAGDPSDPGRMSETVDAMDVIALFCPKYKDRPQIA
RVIQRMSNGYSIHWMAGSYSGPWADAKKRDGRKQVPWVDTIKESDIIYKKIALTSNHKLS
NKVVQTLRSLYAAREGGAS
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactctcgctgggatcgctagcctcaca
gacttgttgaaccagctgcccctcccttcccctctcccggccaccaccactaagagcctc
ctgtataatgggaggatagcagaggaagttacctgcctacttggctgtcgggatgagaat
ttggcctcccagctagcccatggtctcaaccaggtctccacagagcacatagagttgaag
gacaacctgggtagcgatgagccagagggagatgcaccactgctgctgcagaccatgctg
gccaggaaccctggcatcttcagggagaaaacagatgtcatgcagcagccaatggtacaa
cagtacaagatcacccaaaattccatgcatagcccggcccagtctgcaaacttccagccg
acggcaatttctcccaatccatcaagccgctttgtggctccgcagactggttccagtagt
cgttatatgggccagcagaatagtccagtgcctagcccttacactccacaaagccctgcc
actggttacatacagcagtatccccaccaacaaccacccagctacaaccaacaccaacag
atacaacaagtgtctgtagccagtcccatggttccaggcagcataagaaatatccatgag
ggcaaagtatcggggcagatggccaatgctgccaaccatcactcagacagacatggcaca
gaggactacctgaacattgtgcaccgactgggcaatgaggagggtgactccaccatgagg
aatcctccttttcctttgaggtctccacagtcaggctgctctccagcagggagtgaagga
acgcctaaaacgggttctcgtcctccactgattctgcagtcaccacctccctatgcaccc
tcaccaagggaggggggacctgaccagaaacagcagctccagcaaaggaagaaaacccca
gcagtgaaagaggagaaagatatgtacgacattgttagctctccaaacaaggactccagc
aaacttaccctcaaactgtccagggtcaagtcaaatgagtctgacaccccaggtgaggtt
gtgccaggcatggaccagaactctgacaacatagaggcagaattgggctttcagcaggtg
cctgtcctccagcaaaacctagcccggctgcaacagggctccctggcaggtggtgctagc
ggtctccagccacccagttccccttacgacgaggcagagttagacgcacttgctgaaatt
gaaaggatagaacgagaggcggctagtgagaagtgttccaaggaggtgcaagataaagac
aagccactgaagaagaggaaacaagattcttttcccttggagccaggcgcggggggacca
ggtggccccacaggtgctccaggcagtggatcgacaggagggggcaatgcaggcaaactg
accccgcaagaggccacagcagctgggaacggtgccagccgacctcccctcatggtgagc
atcgatctccagcaggctggccgagctgatggccagctcgacccctgtctggctgcccct
attccagcccttgaggcccaacgctggcccgaggaaccagctagtgggcctgctgcagtg
gagggttctgacacggctttgcggttgaaaccagatggaaggccggaagtcatcaagaac
agggtagataaacatgacagcaggagagatggtcgggagtcatctaagcaccggcatgat
gagaagtcctcagacagacggggagatatgcccaagtcatcaaaccgaggcgaacctggc
cgagacagggaccgagattctgacagggacagaaggcatcggagcgagactggtggtcga
gaccgacgctcccccgatgctcgctgccgaagtgaccgagatcggtctggcttccgggct
tcttccactggagagcccggtcggagcagccataggcaagacggttccaaaccggcctca
tctgcctccggtgctaaacttccagattctttccctgctcagctcctgggagggcatagt
ggcgctctgaagaacttccagatccctaagatcaaacgcgacaaggatggtagcggttca
aacgaaagtcaaatgtggtgccagccaaaggttaaactggagaggctgggtttggtgcag
gactttgagaagaggcccaagcctgtggtggttctgaagaagctctccgtcgaccagatc
cagaggatcattcggcacagcaagtcaggaaagaacaggctctcctcaggaaagtctagc
aagagtggtatggacccggcagttctgaaagagcttcctccagagctgctggcagagatc
gagtccaccatgcccctgtgtgaaagagttaagatgaacaagcggaaacgaagtactgta
aatgagaagccaaaatacgctgaagtcagctcggatgaagacgcaaatggagaatctgca
aggaagcgtcagcgtcgagacaaagacaggtcctgggacatggaggagagggagcgccgg
ggttcaggggaacatcggaaaagcgggcagcgggatggccggagaggttccgggagccgc
taccgagactcctccgaagaagattcaccaccacccagcatgagtgaagttgccagaaaa
atgaagatgaaggaaaagcagaagaaacggaaagcatatgaacctaagcttacccatgaa
gagctgatggactcgtccacattcaagaggttcttggcaagcattgacaacatattggag
aatctggaggatgtagattttactgccatggcggcagatgatgatgagatacctgaggaa
tttctactgggtaaacaccagttaaatgagctgggcagtgagtccgccaagataaaggcc
atgggcatctccagcaggatcccagcagacaagctggtgaagctgctgaacatactggaa
aagaatatccaggatgggtccaagctttccaccctgatgaaccatgaccatgatgcagag
gatgaggaaaagctgtggagagacctcataatggagagagtcacaaagtcagcagacgcc
tgcctaacggcccttaatattatgacctcattgcacatgccgaaggctgtctacatagaa
gacgtcatagagcgggtgctacaatacaccaagttccatctccagaacacattgtatcca
cagtatgaccccgtctacagggttggtccgcatggaggtggcttgttgagctccaaggca
aaacgtgcgaaatgctccacacacaagcaacgtgtaatagtcatgttgtacaacaaagtg
tgcgacatcgtcagcaacatatctgagctactagagatccagctacttacagacaccacc
atcctccaggtgtcttcaatgggaatcactccattctttgtggaaaatgtcagtgagcta
cagctgtgtgccattaaactagtgacagcagtgttctcacgttatgagaagcatcggcag
ctgatattggaggagatcttcacgtctttggccagactgcccaccagcaaacgctccctc
aggaacttcaggctgaatagctcagaccaggatggagaaccaatgtacatccaaatggtg
acagccctggtgctgcagctcatccagtgtgtggtccacttacccaacgacaaagacgtc
tttgatgagtacgacagcaaggtggatcaagatgtgttgataaccaattcgtatgagaca
gcaatgagaacagcacagaacttcctctcagtcttcctcaagaaatgtggcagtaagcaa
ggagaagaagattaccggccattgtttgagaattttgtccaggacctgctctctacagtt
aataaaccagagtggccggctgcagaactgttgctcagtctgcttgggagactactggtg
caccagttcagtaataagcagacagagatggctctgagagtagcatctttagactaccta
ggcacagtggctgcccgccttaggaaggatgcagtaaccagcaagatggaccagagatct
attgatcgaattcttcaagagtctccaggtagtgatgagacccagcagctgcagaaggct
ctgctggactacttggaagagaatgctgagaccgatgcttcactggtgtttgctagaaag
ttctacattgcccagtggtttcgggatgctaccacagaagccgaaaagtccatgcggaac
caaaatccgaaggatgaggactcatcagatggaccacaacatgccaaggagatggagacc
actggtgaaattatgcagcgtgctgagaagcgcaagaagttcctgcgcaacatcatcaag
accatgccagctcattttgccacactgaaaatgaactctgacactgtggactatgatgac
tcctgtctgatcgtgcgttatttggcctccatgaggccgttcgcccagagctttgatatt
tatttaacacagatcttgcgagtccttggggaaagtgccattgctgtacgaactaaagcc
atgaaatgtctgtctgaggttgtggctgtggaccccagcatattggcgaggtcggacatg
cagcgtggtgtccacggtcgtttgatggacaactccacaagtgtgcgagaggcagctgta
gagctgctgggcagatttgtgctcagcagaccccaactcactgagcagtactacgacatg
cttatagagaggatactggacactggtatcagcgtgaggaaacgggtgatcaagattctc
agagacatctgtctggagcagccaaccttcactaagattactgagatgtgtgtgaggatg
atccgcagggtcaatgatgaggaaggtatcaagaaactggtgaatgagacattccagaag
ctgtggtttactccaactccagcccatgacaaagagaccatgaccagaaagatcctcaac
atcactgatgttgtggcagcgtgccgagacaccggctatgactggtttgagcagcttctt
cagaatcttctcaagtctgaggaagatgcatcatataagccggccaaaaaggcctgtgtt
cagctagtcgacaatctggtagaacacatcctcaaatatgaggagtctcttgcagagaac
aagggtgtaaactcaacacggctagttgcgtgtatcaccaccttgtacttgttcagcaag
atcagggcccagctcatggtcaaacatgcaatgaccatgcagccttacctgaccacaaag
tgtaacactgccaatgacttcatggtcatctgtaacgtggcaaagatattggagcttgtg
gtacctctgatggagcaccccagtgaaactttccttgccaccatcgaggaagacctcatg
aagctcatcatcaaatacggcatgactgtggtccagcactgtgtgagctgtcttggagct
gttgttaacaaagtcacgcacaactacaagtttgtctgggcttgcttcaacagattctat
ggtgcacttaacaagctgaagattcagcatcaagaggatccaaacagcacaacgttagta
gcgaacaagcctttcctactgcggtcgctcttcactgtgggtgcgctagcccgacacttt
gactttgacctggaggagttcaagggcaccaacaaggttgttatcaaggagaaagttctt
gagctgctgctatacttcaccaaacacgaggatgaggaagtcaagaccaaagccatcatc
ggcttagggttcctcgtaatcatgcatcccagccagatgtttatgccagaggtgaagacc
ttgtacaatggcattctggccgatgcctcctcttccatcaacctcaaaatccagatcctc
aaaaacctccagacgtaccttcaggaggaggacacacggatgcaggaagctgatagagaa
tggaagaaactctcaaaacaggaggatctgaaggagatgggagacatatcttcagggatg
agcagctccattatgcagctttatctgaaacaggtgttggaggcgttctttcatacccag
tccagtgtacggcactttgctctcaacgtcattgctctcacactcaaccagggtctcatc
catcctgttcagtgtgtgccctacctcattgccatgggaacagaccctgagcccagcatg
aggaacaaagctgaccagcagctggtggagattgacaagaagtacacaggattcatccat
atgaaggcagttgctggaatgaagatgtcatacaatttgcaacaggccattgaaatgtct
cgtaagaccatcataagaggttttagacaggacgagacccactcagcactctgctcccac
ctcttcagcatgatccgggggaacaggcagcaccggagggctttcctcatctcactgcta
aacctctttgatgacagttcgaagacagaagtaaacatgctgctgttcattgcggacaac
ctggcctgtttcccataccagagccaggaggagcctctcttcatcatgcaccacatagac
atctgtctgtctgtgtctggcagcaatctgttgcaaaccttcaaagagcttctgttgaag
gagcccaggcgtaaggagaagaagccgaagtggaagcatacgtcggatggggaggatgaa
gaggaaaaaatgaattgcgactctcccaggagcaatgaagacgaaaacggcaacagtgac
gacgatgtggtacggcggcccaaaaaggccagaaaaccagtagaagactcagagagttca
gagtctgatctggaggatttgaaggtggacgatgcggaaaaagtaatgaggctcctccca
gacaatccctcagggctcttggacttcgctaatgcagttcagggcatcctgttgctactg
gtgctcaaacagcatctgaagaaccagtacggattctctgatggtaaaattcagaagtac
tccccaacggagtctgccaaggtgtacgataaggcagtgaacagaaaaagcaatgttagc
ttccacccacgacaatccatcgacttcatctccaacaacttggctcacgccacattgaca
ggcgatgtcaaaaggcggattgtcaaacagtacctagatttcaaggttctgatggagcat
ctggacccagacgaggaggatgaagagggagaagcgtctgccagtgctaacatcagaaac
aaagccataaacgccctactgggaggcatgggccccatatcaggacccagtccacgcaat
caggcaggaccagagacagatgatgactatagtgatggcgatgaaaggaccccagggtcc
tctcgaaggtcaaggcgagcaggtgacccctcagaccccggccggatgagcgagacagtg
gatgctatggatgtgatcgcccttttctgccccaagtacaaggaccggccgcaaattgct
cgagtcatccagaggatgtccaatggatacagcatccactggatggccggctcctattcg
gggccctgggcagatgccaagaaacgcgatggccgcaaacaggtgccttgggtggacact
attaaggagtcggacatcatttacaagaagattgccttgaccagcaaccacaaactgagc
aacaaagtagtacagactttacgctcactgtatgcagcgcgggaaggaggggctagctaa
DBGET
integrated database retrieval system
