Scomber scombrus (Atlantic mackerel): 133979049
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Entry
133979049 CDS
T10651
Symbol
atxn2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133979049 (atxn2)
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NCBI-GeneID:
133979049
NCBI-ProteinID:
XP_062273452
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Position
4:21524021..21550809
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AA seq
1139 aa
AA seq
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MSMKAGGNRSKPGGGSTAGAAASGAGGSGGGRQNLGRGRHSGKGPAAVIFNGVYANMRMV
HVLTSVVGTKCELKVKNGAVYEGVFKTYGPECDLVLDAAHRKSPEPSIGPRKEDIVESII
FKASDVVVVTFKDVDLNFARKVSSDTDNFTDAAVSGKINGEHKEKDLEPWDGGETHNSDS
LESLDTDVSNGWDPNDMFKYNEEKYGVLSTYDSSLSTYTVPLERDNSEEFLKREARAAQL
AEEIEASATYKARVALENDERSEEEKYTAVVRGERETHTLSRENKYIPPGQRNREAMSWG
PGRQNSPRLAQNSAGPSTPRPGPHDYSPSSGADQRVVNGGSSHWPSPCPSPSSRPPSRYQ
SGPSSLPPRATTPTRPPSRPPSRPSRPPSHSSHPSYPSSSSSFSHHGPTSPASTLPKRMS
SEGPPRMSPKSQRTPRAHRVPPCRTTGVPPGVDLISHNAPGEVPVTPPTRSSSSGGTWSS
VVSGAHRPRSPRQNSMGGASPASSSLPSPQTGTAPVETAATPTSAPSPTAASPAPNMVTS
PSGDAKECRVQETRQTSPTANKENIKPLDSSPSIPRPPCKGQPSMAQDHRKQIDKLKQFS
VDFRLQSSSNSEPAFDQMMTKPPRDRADKPKDLPIDKASTVGREGNEEGVVVSAAGTPGG
TPAPSTATTNTSKPGSPSALSPSPSAPDQKRAGLDVTSQGVQTTATSTFSGPKHEEKEEK
KEAVQDQVRKSTLNPNANEFKPRFNTQPKPANTPTPPRPQGQPSPSIVVQQPPTVYGQTV
CFPQMYPLTPVSPGVQKSIIWKSPAMYQVQMPHMTVSQSKPYRPGKVPNMPQQRSDQHHP
PGTPTMMHPATAAGPPIVAQSPAYSAQYFTCSPQQFTSQPLVQQMPHYQSQARFTSAQHV
FSPVMQSSARMMAPHTHGQPGLVSSSTTQYPEQTHTMYVSQQPMPQQYPHPSATLHPHPQ
HPQPSATPTGQGQQGGPPQHGGPPNHPAASPVQHSQHQQAAAAAAAAQALHLANPQQQQM
YSALAPTPPSMTPGPNPQSPQASFPSAQQTVYIHPQQVQHGYNPNHMAHVQQHMQSGIVQ
SHHPAPTHPPMMLMATQGPPGGPQPPMQQTALNHIPVSSTTHFSYLAHPQVQPHHQQQL
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgaaggccggtggaaatcgcagcaagcccggcggtggcagcaccgctggtgcc
gccgcctccggtgccggaggaagcggcggggggagacagaatctgggcagggggagacac
agtggtaaaggtcctgcagcagtcatattcaatggtgtatatgcaaatatgaggatggtc
catgtcttgacttcagtggtggggaccaagtgtgagctcaaggtgaaaaatggagcagtc
tatgaaggagtgttcaagacctatggtccagagtgtgacctggtgttggatgcagctcac
agaaagagcccagagccgagcataggccccaggaaagaggatattgtggagagcattatt
ttcaaggcctccgatgtagttgtggtgaccttcaaagatgtggacctgaattttgccagg
aaagtctcctctgacacagacaacttcacagatgcagcagtgagtggtaagatcaatgga
gagcacaaagagaaagatctggagccctgggatggaggagagactcacaactctgacagc
cttgagtctctggatacagatgtgtcaaatgggtgggaccccaatgacatgttcaagtac
aatgaggagaagtatggagtcttgtctacatatgacagcagcctgtccacatatacggtc
ccactggagcgggacaactcagaagagttcctcaagagggaagcgcgtgccgcccagttg
gcagaggagattgaggccagcgccacgtacaaggcccgcgtggccctggagaatgatgaa
cgctccgaagaggagaaatatactgctgtggtgcgaggggaaagggagactcacacacta
agcagggagaacaagtacattcccccaggtcagaggaacagggaggcgatgtcatggggg
cccggacgtcaaaattcaccccgtctggctcagaactcagccggaccctcaactcctcga
ccaggacctcacgactacagtcccagctctggggccgaccagagggtggtcaatggaggt
tcatcccattggccctcaccctgtccgtctccttcctcccgccccccctctcgttaccag
tctggcccctcctccctgcctcctcgggcgaccacgcccaccaggccaccctccagaccc
ccctctcgaccttccagacctccttctcattcatcccacccctcctatccctcctcctca
tcttccttttcccaccatgggcccacgtcgccagcctccactctgcccaaacgcatgtct
tcagaaggtccaccaaggatgtctccaaaatcccagcggacgcctcgtgctcacagagtg
ccaccctgccggaccactggagtccctccaggagtggacctaatttcccacaatgcccct
ggagaggtcccagtgactccaccaaccagaagcagctcctctggagggacctggtcctct
gtggtcagcggagctcacagacctcgctcccctcgacagaatagcatgggtggtgcctcc
cctgcctcctcctccctcccgtcaccccagacaggaacggctcctgtggaaactgctgcc
accccgacatcagctccctctcctactgctgctagccccgcccctaacatggtcacctct
ccatcaggggacgcaaaagagtgtcgcgtccaggagacaagacaaacatcccccacggct
aacaaggagaacatcaagcccttggatagctcacctagtatccccagaccaccctgtaaa
ggacagccttctatggcacaagaccacagaaaacaaatagataagttaaagcaatttagc
gtagattttaggttgcagtctagttcaaactcagaacctgccttcgaccagatgatgacc
aagcctcccagagatcgagcagacaagcctaaagaccttcctattgacaaagcctccaca
gtggggcgggagggcaatgaagaaggtgttgtagtgagcgcggctggcacccctggaggt
acccctgctccatccaccgccaccacaaacaccagtaagcctggcagcccttctgcactg
tccccatctccatcagccccagaccagaagagggcggggctggatgtaacatcacaggga
gttcagacaacagccacatccactttcagtgggcccaagcatgaagagaaggaggagaag
aaggaggcagtacaagatcaagtgagaaaatcaaccttgaacccaaacgccaacgagttc
aagcccaggttcaatacgcagcccaaaccagcaaacacccctaccccccctagaccccag
ggccagcccagcccctctatcgtggtccagcagcccccaactgtctatggacagacagtc
tgcttcccccagatgtatcctctcacaccagtcagccctggagtgcagaaaagcataata
tggaagtctccagctatgtaccaggttcagatgcctcatatgacagtcagccagtctaaa
ccatacagaccaggtaaagtacccaacatgccccagcagaggtcagaccaacaccacccg
ccgggcacgcccaccatgatgcacccagcaacggcagcaggaccacctattgtagcacag
agccccgcttactctgcccagtacttcacctgcagcccgcagcagttcaccagtcagcca
ctggtccagcagatgccacactaccagtcacaggcaagattcacctctgcgcagcatgtg
ttcagtccagttatgcagagcagtgccagaatgatggcaccacacacgcatgggcagccc
ggcctcgtctcttcctcaactacacaatacccagagcagacacacaccatgtatgtgtct
caacagccaatgccccagcagtacccccaccccagcgctaccttgcaccctcacccgcag
catccccagccctctgctacacctacgggccaaggccagcaaggtggccctccgcagcat
ggaggtccccctaaccacccagccgccagcccagttcagcactcgcagcaccagcaggcg
gcagcagcggcggcagcagctcaggccctccacctggccaacccgcagcagcagcaaatg
tattcagctttggcccccacacccccatcaatgaccccggggccaaatccccagtctccc
caggcatcgttcccttctgcccagcagaccgtctatatccacccacagcaggtgcaacac
ggctacaaccccaaccacatggcacatgtgcagcagcatatgcagtctggtatagtgcag
tctcaccacccggcacccacccaccctccgatgatgctgatggctacccaaggtcctccg
gggggtccgcagccacccatgcaacagactgccctcaaccacatccctgtttcctccacc
acacatttctcctacctggcacatccacaagtgcaacctcatcaccagcagcagctgtag
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