Scomber scombrus (Atlantic mackerel): 133979052
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Entry
133979052 CDS
T10651
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133979052 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133979052 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133979052 (usp30)
04121 Ubiquitin system [BR:
ssco04121
]
133979052 (usp30)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133979052 (usp30)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133979052 (usp30)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
133979052 (usp30)
Ubiquitin system [BR:
ssco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133979052 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
133979052
NCBI-ProteinID:
XP_062273466
LinkDB
All DBs
Position
4:complement(15803106..15809840)
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AA seq
499 aa
AA seq
DB search
MLWCRPESSDKLVGEFLGTGPVIRNKMIKNWGVIGGVAAAIAAGVYVLWGPITERKKRKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEKFSGSPPIQSCKDNQLSTTLLQLLKAL
SSDEPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVTHLF
DMQSLESLPDQDEKTMTCRSRAPLHPIPSPWKFHHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLSIPLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQQGTTANGQVLESQRTT
FVKQLKLGKLPQCLCVHLQRLTWSSEGTPIKRQEHVQFTEYLSMDRYKHNTSTQRSQRIK
CTPKPQKAEKSDDTIEKHTANGTDNNNKPLSNGSCSSVFLHPSAVNPQLSLTYDYSPTEY
LFQLAAVLVHHGDMHSGHFVTYRRSPPSPRSSSPFSSQWLWVSDDSVRKANLQEVLSSNA
YMLFYERVRRLNLALRSEE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagaccagagagctccgataagcttgttggggagtttcttggcaccgga
cccgtaatcagaaacaagatgataaaaaactggggtgtcattggtggagtagctgctgcc
attgcagctggtgtatacgttttgtggggcccaattacagagcgaaagaagagaaagaga
ggtatggttcctggtctgttgaacttgggtaacacctgcttcctgaactccttgcttcag
ggcttggcagcatgtccgtccttcatcaggtggcttgagaagttttcaggttcacctccc
atccagtcatgtaaagacaaccagctgtccacaacactacttcagcttctcaaagctctg
tccagtgatgagcctggggaggaagatgtacttgatgctggatgtctgctggatgttctc
agactctaccggtggcacatcagttcatttgaggagcaggatgcccatgaactttttcat
gtccttacatcttctctggaggaggagcgggatcgccaacccaaagtcactcatttgttt
gacatgcagtcgctcgagagtcttcctgatcaagatgagaaaactatgacttgcagaagt
cgagctcctcttcatccaataccaagtccatggaagttccaccatccttttcatggtcgt
ttaacgagcaacatgtcatgcaagcgctgtgaacaacaaagtccagtacggtatgactcc
tttgagagtctttccctgtccatccctttacctcagtggggtcggccaatttctttagat
cagtgtctacaacatttcatatcctcagaaaccatcaaagaagtagagtgtgaaaactgc
accaagcttcaacaagggaccacagccaatgggcaggttctggaaagccagaggacaaca
tttgttaaacagcttaaactgggaaagctccctcagtgtctctgcgtccatttacaaaga
ctgacatggtctagtgaaggaactcccattaaaagacaggagcatgtgcagtttacagag
tatctatcaatggaccgctacaaacacaacacttccacccagaggagtcagcggattaaa
tgtactccaaagccccaaaaagcagaaaaatctgatgacaccattgaaaagcacaccgct
aatggcactgataacaacaacaaacctctttccaatggaagctgttcgtcagtctttctc
catccttctgctgtgaacccacagctcagcctcacatatgactacagccccacagagtac
cttttccaactcgcggctgtgttggttcaccatggtgacatgcactcaggacatttcgta
acgtaccggcgcagccctccctcacctcgcagttcttcaccatttagctcccagtggctt
tgggtgtctgacgattctgtacgcaaagctaacctgcaagaggtgctgtcttccaacgct
tacatgctcttctacgaaagagtccgaagactgaacctcgctcttcggtcagaggagtaa
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