Scomber scombrus (Atlantic mackerel): 133979073
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Entry
133979073 CDS
T10651
Name
(RefSeq) uncharacterized protein LOC133979073
KO
K23284
C1q-related factor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133979073
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Opsonins
133979073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
ATG16
CCDC39
Tropomyosin
Rod_CreS
GAS
Shugoshin_N
CC_Bre1
FKBP15
HH_AprE
bZIP_1
Cnn_1N
Nup54
DUF3450
Rab11-FIP3
MAD
CENP-F_leu_zip
Filament
ANG-1
BclA_C
ADIP
Spc7
CC_Liprin_beta
Taxilin
SLIDE
NYD-SP28_assoc
ATG14
FPP
PUMA_CC
DUF724
DUF4200
BicD
HAUS1
CALCOCO1
UPF0242
bZIP_2
PA14
Sec20
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
133979073
NCBI-ProteinID:
XP_062273491
LinkDB
All DBs
Position
4:complement(27402351..27483362)
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AA seq
513 aa
AA seq
DB search
MRRAAAFLVLLLCLYWTRAQGESGGVTGNDITQTEVQSEILGVIATSDQTNITPDIWAEL
KELRDMAITHSVELRKLEQQNTAIQARLTASESKNAVLESRMKTSENEVEELKRQNAVLK
AKMNTSENVMEELKIENTDLQSRVTASEDKSTVLEARMNTSENEVEELKIENTDLQSKVT
TFEDKSTVLEARMNTNENVTEELKIENAVLESRMKTSENVMEELKREDTDLQSRVTAFED
KSTVLEARMNASENEVKELKRQNAVLESRIKICENEVGELKRQNTDLQSRVTTFEDKSTV
LEARMNTSENEVEELKIENTVLKARFKTSENVMEELKIENTDLQSRVTSFEDKSTVLEAR
MNTSENEVEELKRQNADRPKVAFSLGLTDNRQVGPFNTDTTLKFSKVFTNFGQAYSPTTG
HFTAPVRGVYYLSFTTVDVRTKVWSRIYLYHNDKRVLFNDNFNDEHGYTRFSNSLVLQLE
KGDVVFMVLPANYSVFDDTNDHTNFNGFLLFPL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtgctgcagcttttctggtgttgctgctctgtctgtactggacgagggctcag
ggtgagagtggaggggtgacagggaatgatatcactcagacggaggttcagtctgagatc
ctgggtgtcatagcaaccagtgatcagaccaacatcacccctgacatctgggctgagctg
aaggagctgagagacatggccatcacacacagtgtggaactgaggaagctggagcagcag
aatacagccatacaggccagactgacagccagtgaaagcaagaatgcagtgttggagtcc
agaatgaaaaccagtgaaaacgaggtggaggagctcaagagacagaatgcagttttgaag
gccaaaatgaacaccagtgaaaatgtgatggaggagctcaagatagagaacacagatctt
caatccagagtaacagcgagtgaagataagagcacagtgttggaggccagaatgaacacc
agtgaaaacgaggtggaggagctgaagatagagaacacagatcttcaatccaaagtaaca
acatttgaagataagagcacagtgttggaggccagaatgaacaccaatgaaaatgtgacg
gaggagctcaagatagagaatgcagtgttggagtccagaatgaaaaccagtgaaaatgtg
atggaggagctcaagagggaggacacagatcttcaatccagagtaacagcatttgaagat
aagagcacagtgttggaggccagaatgaacgccagtgaaaacgaggtgaaggagctcaag
agacagaatgcagtgttggagtccagaattaaaatctgtgaaaatgaagtgggggagctc
aagagacagaacacagatcttcaatctagagtaacaacatttgaagataagagtacagtg
ttggaggccagaatgaacaccagtgaaaacgaggtggaggagctgaagatagagaacaca
gttttgaaggccagatttaaaaccagtgaaaatgtgatggaggagctcaagatagagaac
acagatcttcaatccagagtaacatcatttgaagataagagtacagtgttggaggccaga
atgaacaccagtgaaaacgaggtggaggagctgaagagacagaatgcagaccgaccaaag
gtggcgttctcacttggtctcactgataatcgacaagttggacccttcaatactgacaca
acacttaagttcagtaaagtcttcaccaactttggtcaggcctacagtccaactacaggc
cacttcacagccccagtcagaggagtctactacttgtcattcactacagtggatgtccgg
actaaagtatggagtcgtatttatctctatcacaatgacaagagagtgttgtttaatgat
aatttcaatgatgaacatggctataccagattttctaattcactggttcttcagctggaa
aagggggatgtggtgttcatggttttacctgccaactatagtgtattcgatgataccaat
gatcatactaactttaatggatttctgctttttccactgtga
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