Scomber scombrus (Atlantic mackerel): 133979085
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Entry
133979085 CDS
T10651
Symbol
vps37ba
Name
(RefSeq) VPS37B subunit of ESCRT-I a
KO
K12185
ESCRT-I complex subunit VPS37
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133979085 (vps37ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133979085 (vps37ba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133979085 (vps37ba)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
133979085 (vps37ba)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133979085 (vps37ba)
Exosomal proteins of colorectal cancer cells
133979085 (vps37ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
DUF7342
Motif
Other DBs
NCBI-GeneID:
133979085
NCBI-ProteinID:
XP_062273506
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All DBs
Position
4:2406400..2421331
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AA seq
284 aa
AA seq
DB search
MSSFADKFSAYTMTQLNEILEDDEKLTQMVQEMDEMQEVQQSKETTLVSNRTLAELNLAL
QPRLEHNKEELTKRYNCLQENFETYQLRKSTLDHKSGNTSLDILLALLQAEGAKIEEETE
NMADSFLDGDMTLDSFIDAYHNKRKLAHLRRVKIEKLQEMVMRGQHLPQASVPTSRSQDV
SAAARPSSSLLGEDGSGSSPVPQPRRKPPPPPSHPAPILNQVPTNPQSPLFYSATPYPPI
PPRTSQQFPNVPTGYPSHFLSQYPPALPQRPPPRMAPQPGFIMQ
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtctagttttgccgacaagttcagcgcttacacgatgacccagctcaacgaaatactg
gaggacgacgaaaagctcacgcaaatggtacaagagatggacgagatgcaggaggtccag
cagagcaaggagacgactctggtcagcaaccgaaccctggcggagctgaatctggccctg
cagcctagactggagcacaataaagaggagctcaccaagcgctacaactgtcttcaggag
aactttgaaacctaccagcttcgcaagtccaccctagaccacaagtcaggaaacacctcc
ctggacattttgctggctctgctgcaggcagagggagccaaaatagaagaggagacagag
aatatggccgactccttcctggatggcgacatgaccctggactccttcatcgacgcctac
cataacaagaggaagctggcccacctgagacgggtcaagatcgagaagctgcaggaaatg
gtgatgaggggccagcatctcccccaggcgtcagtccctacctcccgatctcaggacgtg
tcagcggcagccagaccttcctcctccctcctcggcgaggacggcagtggctcgtccccg
gtcccccagcctagaaggaaacccccacctcctccatcccatccagccccgattcttaat
caagtccccactaacccccagtctcccctcttctactccgcaacgccataccccccaatc
cctccaagaacgagccaacaattccccaacgtccccactgggtatcccagccacttccta
tctcagtacccgcccgctctgccgcagaggcctccacctcgcatggccccgcagcccggc
ttcatcatgcaataa
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