Scomber scombrus (Atlantic mackerel): 133979098
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Entry
133979098 CDS
T10651
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03022
Basal transcription factors
ssco03420
Nucleotide excision repair
Brite
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
133979098 (gtf2h2)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
133979098 (gtf2h2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133979098
NCBI-ProteinID:
XP_062273520
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Position
4:5903629..5912589
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AA seq
392 aa
AA seq
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MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVVESHGQVRLGMMRH
LYVVIDCSRSMDDHDLKPNRLTSTLKLIEAFVEEYFDQNPISQVGLITTKNKRAEKLTDL
AGNPKKHTAALKKAKDTVCIGEPSLYNSLNLAIQTLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTMASLTDQDAKPSFSMSHLDSSSAPGLSLGGYFCPQCHSKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQVFTESPLEELQGDRFCQGCEGELKDKCVFTC
PSCLKAFCMDCDLFIHDSLHCCPCCIHSQSAP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagccaagcgctgggaaggcggctatgagaggacatgggaa
gtgctgaaggaggatgagtccggctcactcaaagccacagtggaggaaatcctgttccag
tccaaaaggaaaagggttgtagagagccatggacaagtgaggctggggatgatgcgtcat
ctctatgtggtgattgactgttcaagaagtatggatgaccacgacctgaagccgaaccgc
ctcacctctactctgaagctgatagaagcttttgttgaagagtattttgaccaaaacccc
atcagtcaggtgggcctcatcactacaaagaataaaagagctgagaagctgactgacctg
gcagggaatccaaagaagcacactgctgctctgaagaaagcaaaggacaccgtgtgtata
ggagagccgtccctctacaactctctcaacctcgccatacagactctcaaacacatgcct
ggacacacgagccgggagatcctgatcatcctcagcagcctcaccacatgtgacccagcc
aacatctacgaactgatcaagaccctgaagtctctgaaggtgcgggtgtctgtgatcggc
ctgtcagcggaggtgcgggtgtgcacagtgttgaccagggagacgggcggctcataccac
gtcatcctggacgagagccacttcaaagagctgctgatgctgcacgtcaaacctccacct
gccagctcctcgtctgaatgctctttaatacgcatgggttttcctcagcacaccatggcc
tctctgactgaccaggacgccaagccttcattcagcatgtctcatttagacagcagcagc
gctcctggtctgtctttgggaggatacttctgtccacagtgtcactccaagtacacagag
cttcccgtggagtgtaaagtctgtggtttgactctggtgtcagcccctcatcttgccaga
tccttccaccacctcttccccctccaagtctttacagagagtcctctggaagagctccaa
ggagacaggttctgtcaaggatgtgaaggagagctgaaggataaatgtgtatttacctgt
ccatcatgtctcaaagcgttctgtatggattgtgatctgttcatccatgactccttgcac
tgttgcccctgctgtattcacagtcagagcgccccctga
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