Scomber scombrus (Atlantic mackerel): 133979109
Help
Entry
133979109 CDS
T10651
Symbol
plat
Name
(RefSeq) tissue-type plasminogen activator
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04371
Apelin signaling pathway
Brite
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
133979109 (plat)
Peptidases and inhibitors [BR:
ssco01002
]
Serine peptidases
Family S1: chymotrypsin family
133979109 (plat)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
133979109 (plat)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133979109
NCBI-ProteinID:
XP_062273531
LinkDB
All DBs
Position
4:22895368..22908291
Genome browser
AA seq
578 aa
AA seq
DB search
MTRTLLMLLSALCCCLADNVELLRSKRGTRFYRARCVDSESSAVRNFGDTWLRWRGQRVE
YCRCTSSGQQLCHFVPVINCYTSQCYNGGICKEAVYTSDYICQCPRGFSGSQCEINNNEK
CVAGQGTGYRGTWSISHTRSECINWNSTSLRGRRFTASKVDASILGLGNHNFCRNPDNDN
TPWCYVYKGTQINWEFCSLPKCREDKYRECTMGSGQSYRGTKAVTKSGSRCIPWDSPAVK
RKLNNAWRSNALEQGLGSHSFCRNPDGDVGPWCHTYKNMQLTWELCDIPKCSRRPPMIPT
LGPRAPTTNNNRATCGQRLDNTLNRPAYRLFGGRLSDITEQPWQAAINVFSTRSKQHFHL
CGGVLIDSCWILSAAHCFEERQKAEALEVILGRTFRKQNSSSEQIFEVEKYWIHENFDKE
TFDNDIALLKLKTDIGMCAVNSPEVHPACLPEPGLVLPDWTECEISGYGKDSEFAAMNSE
RVKRGYVRLWPNERCVPDVLSGRPVTSNMLCAGDTRGLDDACKGDSGGPLVCRNKDRMTL
MGVISWGDGCGQRDKPGVYTRVTHYIDWINGKIKANPV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaacactattaatgctcctgtctgctctctgctgctgtctagcggacaatgtg
gagctgctccgctcaaagagagggactcgtttttatagagcacgttgtgtcgatagtgag
tcatcagcagtgcgtaattttggggacacttggctgcgatggaggggacaacgtgtggaa
tattgccgttgtacatcaagtggacaacagctttgtcattttgtgcccgtcatcaactgc
tacacgtctcagtgctataacggagggatctgtaaggaggccgtgtacacttcagactac
atctgccagtgtcccagaggcttcagtgggtctcagtgtgagatcaacaacaatgagaag
tgtgtggcggggcagggcacagggtaccgtggcacatggagcatcagccatacaagatca
gagtgcattaactggaactctacatcactgaggggaaggaggttcaccgccagtaaagtg
gacgccagcattcttggattgggcaatcacaatttctgcaggaaccctgacaatgacaac
actccctggtgttacgtctataaaggcactcagatcaactgggagttctgttctttgcca
aagtgtcgagaagataagtacagagagtgtacgatgggctctgggcagtcttacagagga
acaaaagctgtcactaagagcggctctcgctgtatcccatgggactcacctgctgtgaag
cgcaagctcaacaatgcatggagatcgaatgcactggagcagggattgggcagccacagc
ttctgcaggaatccagatggtgatgtgggtccatggtgtcacacctacaagaacatgcag
ctgacctgggagctctgtgacattcctaaatgttcgagacggccacctatgatccccact
cttggccctcgtgcccccacaactaacaataacagagcaacttgtggccagcgtttggac
aacaccctgaatcgccccgcctaccgcttgtttgggggcagattgagcgacatcacggag
cagccctggcaggcagccataaatgttttcagtacccgtagcaaacaacacttccaccta
tgtggaggagtcctcattgattcctgctggatcctctctgctgcacactgcttcgaggaa
agacaaaaagcagaggcgttggaggtgattctgggccgaacatttcggaagcagaattca
agcagcgagcagatttttgaagttgagaagtactggatccatgagaactttgacaaagaa
acatttgacaatgacatagctctgctgaagctcaagacggacattggcatgtgtgctgta
aactctccagaggttcatcctgcatgtctgcctgaaccagggctggtgctgcctgactgg
actgagtgtgagatctcaggctatggaaaagactctgaatttgctgcaatgaactccgag
cgtgtcaagagaggttatgttcgtttgtggcccaacgagcgctgcgtcccagatgtgctg
tctggacgccctgttacctccaacatgctgtgtgcaggtgacaccagaggcctggatgat
gcctgcaagggagactctggtggcccactcgtctgccgaaacaaggacaggatgaccctt
atgggtgtgatcagctggggtgatggttgtgggcagagagataagcctggtgtttacacc
cgtgtcactcattacatcgactggattaacggcaaaattaaggcaaacccagtctaa
DBGET
integrated database retrieval system
