Scomber scombrus (Atlantic mackerel): 133979151
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Entry
133979151 CDS
T10651
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein
KO
K10890
fanconi anemia group C protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133979151 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133979151 (fancc)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
133979151 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
133979151
NCBI-ProteinID:
XP_062273593
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Position
4:complement(20039937..20068229)
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AA seq
596 aa
AA seq
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MSQPLVPLQQKAEPLLDVQEMQLWLEKAVAWGQADSPDARKDTCLHLSRLRDFLQQLLTH
IHNTSSTTETMKRLPVIGQFLGRLCWNHYVTADATSRRLLFQCLWGLYSEHPSNAVEGKA
NQWIRKVLCQLTTEEDDTATQTLVKHMGVPTTQYHLKVLRKMVALVQENIGKGCSLLGDI
SQRCSCDSILAASEACVPLVTCAEAAPLIGALLQRPLICARAALSEDFLDALSSAYSSNC
LLLEEQAVVSMWYHSLSSLEEAVLSLLESVLANTGSTLHRLEQQLAQSLLPKACAQHCSI
FLVVNDIFRSILKQLEGNECVKSVIHTFTNRFVRELSLLQPKMSISLKAFFPLSPQNLLG
PLLTQPSEMPQESWRHHLNWLSGSLQRLTEEEEEDEDGSSTRGHHKVFEAWFLLVQCAHW
MQATAQLLVTARPEDCDPLLRLLTFYHHPTNRGHHRAQQLVRAKDAWDHLCPLFSVLACP
PPIDHLQSLVALLSPNPQQPSLAPLSVLDLLVNFAVFSQKSLSGSTEILQTVVDRTGLVS
EAVCVLGSLELRLNGGSCLSSDSNRVHLRIKALQNTLTHMYAAQSPAEKQAHTHPL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccactggtcccgctccaacaaaaggcagagcccttgctggatgtccaggag
atgcagctctggctggagaaagcggtggcttggggccaggctgacagtccggatgctcgg
aaagacacctgcctacacttgagcagactgagggatttcctccagcaacttctgacacac
atccacaatacgagctccacaacagagaccatgaagcggctacctgtcataggccagttt
ctaggccggctttgctggaaccattatgtcacagctgatgctacaagcagaaggctgcta
ttccagtgtctgtggggactgtactcagagcatccaagcaatgctgtggaaggaaaggcc
aaccagtggatacggaaagtgttgtgtcagctcaccacagaagaagatgatactgcaacg
cagacattagtgaaacatatgggtgtaccaacaacacagtaccatctcaaagtcctcaga
aagatggtggcactagtgcaagaaaacattggaaaaggctgcagtttgctgggcgacata
agtcagaggtgttcatgtgacagtattctggctgcatcagaggcatgtgtccccctggtt
acgtgtgctgaggctgctcctcttattggtgctttacttcagcggccattgatttgtgca
agggcagctcttagcgaagacttcttggatgcgctgagctccgcctattccagcaattgc
ttgttgttggaggagcaggctgttgtctctatgtggtatcacagcctgtccagcctagaa
gaagcagtgctcagtctgctggagtctgttctcgccaacacagggtcaacactgcacagg
ttggagcagcaactggcacagtcactgctgcctaaagcctgcgctcagcactgctcgata
ttcttggttgtaaatgacatcttcaggtccatccttaagcaactggaaggaaatgagtgt
gttaagtctgtcatccacacttttaccaaccgtttcgtcagggaactgtcactgttgcaa
cctaagatgagtatatctttgaaggccttcttcccactgtcacctcagaatctgctgggt
cctctcttgacccaaccttcagagatgcctcaggagtcttggagacatcacctgaactgg
ctcagtggctcattacagagactgacagaggaggaggaggaagacgaagacggcagcagc
accaggggtcaccacaaagtgtttgaggcctggttcctgctggttcagtgtgcccactgg
atgcaggcgacggcccagctgctggtgactgcaaggccagaggactgtgaccccctgctg
aggctgctgaccttctaccaccatcccaccaacagggggcaccacagggctcaacagctg
gtacgtgccaaagatgcatgggaccacctctgcccccttttctcagtattagcttgtcct
cctcccattgaccacctacagtcactggtcgcccttctgtcaccaaaccctcagcagcca
tcactagctccattatcagtccttgacctcttggtcaactttgctgttttctcccaaaaa
tcgctgagtggatcaacagagattttgcagacggtggtggatcggactggtctggtcagt
gaagcagtgtgtgttctcggctcactggagctcagactgaacggaggaagctgcttatca
agcgactctaacagagttcatctcaggatcaaggcgcttcaaaacacacttacacatatg
tatgcagcacagagccctgctgagaaacaagcacacactcacccactctaa
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