Scomber scombrus (Atlantic mackerel): 133979166
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Entry
133979166 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133979166
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GFIT
Other DBs
NCBI-GeneID:
133979166
NCBI-ProteinID:
XP_062273654
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Position
1:complement(38208112..38223670)
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AA seq
1079 aa
AA seq
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MDQCEDREEGVPPSKSSLCGEHDSQTKAQSIRMQQQRADSPEPSCVSMKSDASMDRPIKF
KDGRPADGRVQQQSSEVPSDQSAQQHQTQLDSIFMLLEENIVTFVKNELKGVQRGLSLDY
PECLESQSEDEEVLEGEEEEQRRSSRDAFLKITLHFLRRMKQEELAERLQRARAAKCRRK
LKSNLEKKFQCLFEGIAKAGNPTLLNQIYTPLYITEGGTAEVNDEHEIRQIETASRKPDR
PETTIRQEDIFKTSPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPF
TFRELNVLKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEI
LTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKE
EYFRKRFKDEEQASTIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSREGGELPKTLT
EMYIHFLVVQSKLKNIKYDGGAETDPHWSPESRKMIESLGKLAFEQLQKGNLIFYESDLT
ECGIDIRAASVYSGMFTQVFKEERGLYQDKVFCFVHLSLQEFLAALHVHLTFIESGVNLL
AEEQTTSWWPEVFRDKSTRFYQSAVDEALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLLT
GSNSQTNEKTVDYIKKKLSENVSAERSINLFHCLNELKDRSLVEEIQQYLRSGSLSTDKL
SPAQWSALVFILLSSEKDLDVFDLKKYSASEEALLSLLPVVKASNKALLSGCNLSERSCA
ALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCGLETLSLSGCLITEEGCASL
ASALSSNPSHLRELDLSYNHPGDSGEKLLSAGLEDPHWRLDTLRMDHGGLQRLKPGPRKY
ACELELDPNTMHRKLKLSDNNRKVTCAWGDQSYPDHPDRFDSCPQLLCRNDLTGRCYWEV
KWRGEVSISVSYRRISRKGNSDDCEFGRNDQSWSLFCSDDGRYSVRHNKKETVILSPVSN
RVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTTFTEPLYAGFGFGLWFNWYGSSVSLCPL
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaagctctctgtgtggg
gaacatgacagccagaccaaagctcagagtatcaggatgcagcagcagagagcagactct
cctgaacccagctgtgtgtccatgaagagtgacgcgtctatggatcgtcctattaagttt
aaagatggacgacctgctgatggaagagttcaacagcagagctcagaggttcccagtgat
cagtctgcacagcagcatcaaacacagctggactccatatttatgctgctggaggagaac
atcgtcacttttgtgaagaacgagctgaagggagtccagaggggtttgagcctggattac
ccagaatgcttagagagtcagagtgaggatgaggaggtgttggaaggtgaggaggaagag
cagaggaggagcagcagagacgcatttctgaagatcacactgcacttcctgaggagaatg
aagcaggaagagctggctgagcgtctgcagagagctcgtgctgcaaagtgtcgacgtaaa
ctcaagtctaacctggagaagaagttccagtgtctgtttgaggggatcgctaaagcagga
aacccaacccttctgaatcagatctacacaccgctctacatcacagagggagggactgca
gaggtcaatgatgaacatgagatcagacagattgaaacagcatccaggaaaccagacaga
ccagaaacaactatcagacaagaagacatctttaaaacctcacctggaagagatgaacca
atcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaag
ttcactctggactgggctgaagacaaagccaaccaggacatacacttcacatttccattc
actttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcat
cacttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtg
ttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaacactgagatc
ctgactgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcaggggg
aaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatc
cctcctgagtgtgtcgacatggtgacagaggtcagagggttcactgacccacagaaggaa
gagtacttcaggaagagattcaaagatgaggagcaggccagcaccatcatctctcacatc
aagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgct
acagttctggaggatgtgttgaaaagcagagagggaggagagctgcccaagaccctgact
gagatgtacatccacttcctggtggttcagtccaaactgaagaacatcaagtatgatgga
ggagctgagacagatccacactggagtccagagagcaggaagatgattgagtctctggga
aaactggcttttgagcagctgcagaagggcaacctgatcttctatgaatcagacctgaca
gagtgtggcatcgatatcagagcagcctcagtgtactcaggaatgttcacacaagtcttt
aaagaggagagagggctgtaccaggacaaggtgttctgcttcgtccatctgagccttcag
gagtttctggctgctcttcatgtccacctgacattcatcgagtctggagtcaatctgctg
gcagaagaacaaacaacatcctggtggcctgaagtgttcagagacaaatcaacacgtttc
taccagagtgctgtagacgaggccttaaagagtccaaatggacacctggacttgttcctc
cgcttcctcctgggtctttcactgcagaccaatcagactctcctacgaggtctgctgaca
ggaagtaactcacagaccaatgagaaaacagtcgattacatcaagaagaagctcagtgag
aatgtgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaaggatcgt
tctctagtggaggagatccaacagtacctgagatcaggaagtctctccacagataaactg
tctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaagatctggac
gtgtttgacctgaagaaatactctgcttcagaggaggctcttctgagtctgctgccagtg
gtcaaagcctccaacaaagctctgttgagtggctgtaacctctcagagagaagctgtgca
gctctgtcctcagttctcagctcccagtcctctagtctgagagatctggacctgagtaac
aacaacctgcaggattcaggagtgaagcagctttctgctggactggagagtccacactgt
ggactggaaactctcagtctgtcaggatgtctgatcacagaggaaggctgtgcttctctg
gcctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcat
ccaggagactcaggagagaagcttctgtctgctggactggaggatccccactggagactg
gacactctcaggatggaccatggtggactgcagagactgaaacctggtccgaggaagtat
gcctgtgaactggaactggatccaaacacaatgcacagaaaactcaaactgtctgataac
aacaggaaggtgacatgtgcgtggggggatcagtcataccctgatcatccagacagattt
gactcctgtcctcagctgctgtgtagaaatgatctgactggtcgctgttactgggaggtc
aagtggagaggagaggtttctatatcagtgagttacagaagaatcagcaggaaaggaaac
agtgatgactgtgagtttggaaggaatgatcagtcctggagtctgttctgctctgatgat
ggtcgttactctgtccgtcacaataagaaagaaacagtcatcttgtctcctgtttctaac
agagtagcagtgtatgtggactgtcctgctggcactctgtccttctacagagtctcctct
gacacactgatccacctccacaccttcaacaccacattcactgaacctctgtatgctggg
tttgggtttggactttggtttaactggtatggttcctcagtctctctgtgtcctctgtag
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