Scomber scombrus (Atlantic mackerel): 133979182
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Entry
133979182 CDS
T10651
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133979182 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133979182 (usp39)
Spliceosome [BR:
ssco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
133979182 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
133979182
NCBI-ProteinID:
XP_062273638
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Position
4:complement(16534898..16541177)
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AA seq
500 aa
AA seq
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MVSIKREREAEVDDDDNEDGVVTKIRRGRAVEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHITGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNV
PPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPSSITKAFQGSMRIFSKKLPHPDLLP
EEKEALLLTEEYQEQLSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGSTE
KEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE
AQATEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSEA
YIQIWKRQESDDDTNNHTGA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtttctatcaagcgagaaagagaagctgaggtggacgacgatgacaacgaagacggc
gtagtgaccaaaatacggcgaggacgtgcagtagaagaccggagaagccgccactgccct
tatctcgacaccataaacaggagtgtgctggactttgactttgagaagctctgctccatc
tctctctcccacattaatgtctacgcctgccttatatgtgggaaatactttcaaggcaga
ggtctgaagtcccatgcttacactcacagtgtacagttcacccatcatgtgttcctcaat
ctgcacacactcaagttttactgtctgccagacaactacgagatcatcgactcctcactg
gaggatatcacgtatgtgctgaagccaactttcaccaaacagcacatcaccggccttgac
aagcagggtaagctgtacagagcctacgacggtacgacctacctgccaggcattgtgggg
ctcaacaacattaaagccaatgactacgccaatgtggtgttacaggcattttccaatgtt
ccaccattgcgaaactacttcctggaggaggaaaactacaggggaatccgcagaccacca
ggggacatcatgttcctcttggtacagaggtttggcgagctgatgcgcaaactttggaat
ccgagaaacttcaaggcccacgtgtctccccatgagatgctgcaggctgtggtgctttgt
agcaagaagaacttccaaattaccaagcaaggagatgctgtggacttcatgacgtggttc
ttaaatgctctgcatggtgctctaggaggcacaaagaaaaagccatcaagcattacaaaa
gcatttcaaggctccatgcggattttctcgaagaaactcccacacccagatttactacca
gaggagaaagaagcattgctcctgacagaggagtatcaggagcagctgtctgagtccact
ttcttgttcctgacccttgacctcccaacagccccactgtataaggatgagaaggagcag
cttattattccacaagtccctctctttaacatcctgggaaagttcaacggcagcacagag
aaggaatacaaaacctacaaagaaaattttctgaaaaggttccagttgaccaaactgccg
ccgtacctcatcttttgcatcaaaagattcacaaagaataacttctttgtggaaaagaac
cccactatcgtcaacttccccatcacgaatgtagacctccgtgaatacttgacagaggag
gcccaagctacagagaagaacacaacttatgaccttgtcgccaacgtggtgcatgatggg
aaacccactgagggagcgtacagaatacacgtcctgcatcatggaactgggaagtggtat
gagatgcaggacctgcaggtgacagacattctcccccagatgattacactgtcagaggct
tacatccagatctggaagagacaggagagtgatgatgacacaaataaccacacaggggcg
taa
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