Scomber scombrus (Atlantic mackerel): 133979211
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Entry
133979211 CDS
T10651
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00310
Lysine degradation
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
133979211 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133979211 (smyd1b)
Enzymes [BR:
ssco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
133979211 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
133979211 (smyd1b)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
133979211 (smyd1b)
BRITE hierarchy
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GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
RIP_P131-like
ARMET_C
Motif
Other DBs
NCBI-GeneID:
133979211
NCBI-ProteinID:
XP_062273669
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Position
4:21297994..21306613
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AA seq
476 aa
AA seq
DB search
MENVEIFNTAEKGRGLKATKEFWAGDVIFSEPGLSAVVFDSLAENICHSCFRRQDKLHRC
GQCKFAHYCDRTCQRAGWAEHKQECGAIKAYGKAPNESIRLVARIMWRLDKEGSIVSDMQ
LTTLDELEDHITDMQEDELKELKVDIHNFLEYWPRGCKQHTLDAVSHMFGVVNCNGFSVS
DQRGLQAIGVGIFPNLCLVNHDCWPNCTVILNHGKIELRAMGKIEEGDELTVAYVDFLNL
TEERQRHLKAQYFFECTCEHCKNHIKDDLKLAGKEVDGVKPSEEQVKEATDFCWKMLEKM
EEARLKGDYHEVVKTCRECIEKTDPVLADTHIYLLRMWSTLSEVQAYLQYFDDAADYARK
MVEGYIKLYNPNNAALGMAAMRAGVTHWQAGQIEVAHGMICKAYAIIMVTHGPTHPITKD
LEAMRVQTEMELRMFKQNEYVYHSMREAALKNKPMTMLHEPKSVEDGIKNLFHRRK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtggaaatatttaacacagctgaaaaggggaggggtctgaaggctaccaag
gagttttgggctggagatgtcattttttctgaacctggtctttcagctgttgtgtttgac
agtctggcagagaatatttgccacagctgtttccgcagacaagacaagctccacaggtgc
ggccagtgcaaattcgctcattactgtgatcgaacctgccagcgggctggctgggctgaa
cacaagcaagaatgtggtgccatcaaagcttacggcaaggcacccaatgagagcatccgt
ttggtggctcgcatcatgtggcgcctggacaaggagggcagcatcgtatctgacatgcag
ctgaccacactggacgaactggaggaccacattactgacatgcaggaggatgagctgaag
gaattgaaagtggacatccacaatttcctggagtactggcctcgtggctgcaagcagcac
acgcttgacgctgtctctcatatgtttggagtggttaactgcaacggctttagtgtgagc
gaccaaaggggacttcaggcgatcggagtgggtatcttcccgaatctgtgtctcgtgaat
catgactgctggccaaactgtactgtcatcctcaaccatggaaagattgagctgcgtgct
atgggtaagattgaagagggagatgagctgacagtggcgtatgtagacttcttgaatttg
actgaggagagacaaagacacctgaaagcacaatacttctttgaatgtacatgtgaacac
tgcaagaaccacatcaaagatgacttaaaactggcgggaaaggaagtggatggagtcaag
ccttcagaggagcaggtaaaagaggcaacagatttttgctggaaaatgctggagaagatg
gaagaggctcgtttaaagggcgattaccatgaggtggtaaaaacctgcagagagtgcata
gagaaaacagacccggtcttggctgacactcacatctacctgctgaggatgtggagcaca
ttaagtgaagtgcaagcctacttgcagtacttcgacgatgctgcagattacgcccgcaaa
atggtggagggttacattaagctgtacaacccaaacaacgctgctcttggcatggctgct
atgcgagcaggagtcacccactggcaggctgggcagatagaagttgctcacgggatgatc
tgcaaggcctatgccattatcatggtcacccacggcccaacacatcccatcaccaaggac
cttgaagctatgcgcgtacagacagagatggagctgaggatgtttaagcagaacgaatac
gtttaccacagtatgagagaggcagccctgaagaacaaaccaatgaccatgctgcatgaa
cccaagtctgtggaggatggaatcaagaacctcttccaccgaaggaagtaa
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integrated database retrieval system
