Scomber scombrus (Atlantic mackerel): 133979216
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Entry
133979216 CDS
T10651
Symbol
git2a
Name
(RefSeq) ARF GTPase-activating protein GIT2a isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133979216 (git2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133979216 (git2a)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
133979216 (git2a)
Endosome - Golgi transport
Arf GTPase associated proteins
133979216 (git2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
GIT_SHD
ArfGap
Ank_2
Ank
Ank_4
Ank_5
Ank_3
TTRAP
Sen15
ADIP
YabA
UPF0449
Motif
Other DBs
NCBI-GeneID:
133979216
NCBI-ProteinID:
XP_062273676
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All DBs
Position
4:complement(15694237..15709983)
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AA seq
760 aa
AA seq
DB search
MSKRLRNAEVCADCSVTEPRWASVNRGVLICDECCSVHRSLGRHSSQVRHLMHTPWPSTQ
LQMVQTLYSNGANSIWEHSLLDPASVMSGKRKANPQDKLHPNKSEFIRAKYQMLAFVHRM
PCRDDDSLTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQV
SQAELLTVYGADPGAPDSNGKTPIDYAREAGHHDLADRLVEVQYELTDRLAFYLCGRKPD
HKNNQHFIVPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLA
TQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGN
SVASPKDNVELILKSVGVRHCSDSQDNDQPDYDSVASDEDTDQELPSSKGDRTKSLDSDL
SDSPITMQEYLDVKTALSASEAKIQHLMKANNNLSDELRLMQKKLQSLQSENTSLRRQVP
TNIYQIPSGSDYPDPSSPSALKRRQSARASRPMSMYETGSGLKPYLPKGETPYPEEGIPT
LQPFPSHTERGAFVTTSSSLPSFPSTLSWSKDESTQKASKLEKQSSMPESDYDNTFNDSE
MDDSGLYRRGRLRSSGWLGEGTSIPELDDLEMESDPSLPSTEDVIRKTEQITKNIQELLR
AAQDNKHDSFIPCSERIHVAVTEMAALFPNKPRSETVRSSLRLLTSSAYRLQGECRKAVP
SEGCPGPDMQLVTQQVIQCAYDIAKAAKQLVTITTKENTN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgcctgagaaacgctgaagtctgcgctgattgcagtgttacagagccacgc
tgggcctcggtgaacagaggtgtgttgatttgtgatgagtgctgcagtgttcatcgaagt
ctgggcagacacagctctcaagtccgccacctaatgcacacaccatggccttctacacag
cttcagatggtgcagacgttatacagcaatggtgcaaattcaatatgggagcactccctc
ctggaccctgcatctgtgatgagcggaaaacgcaaggctaaccctcaggacaaattgcac
ccaaacaaatcagaattcataagagccaaatatcaaatgctggcatttgttcatcgcatg
ccttgccgggatgacgacagcttgacagccaaggatttaagcaagcaacttcactcaagt
gtacgcaccgggaatctggagacttgtttgaggttgctctctctgggcgcgcaagctaat
ttttttcaccctgaaaaaggaaacactcccttgcatgtagctgcaaaggccggacaagta
tctcaggctgaacttttaactgtttatggggcagatcctggagcccctgacagcaatggc
aaaactcccattgactatgcaagggaagctggccatcacgacctggcagacagactggtg
gaggttcagtatgaacttactgatcggttggcgttctacctttgtgggagaaagccagat
cataaaaataatcagcacttcattgttccacaaatggccgacagcagtttagatttatca
gaactggccaaggcagcaaagaaaaagctgcagtctctcagtaatcatttattcgaggag
cttgccatggatgtgtatgatgaggtggaccgacgagagactgatgcagtgtggttagct
acacagaatcacagcaccctggtgacggagacgactgtggtgcctttcctccctgtgaat
ccagaatattcatcaacacgaaaccagggacgccagaaacttgcaagattcaatgcacat
gaatttgcaactcttgtgatcgacatactaagtgatgctaagcgtagacaacaagggaat
tcagtagccagtcccaaagacaatgttgaacttatcctgaaaagtgtgggtgtcaggcat
tgtagtgacagccaagacaatgaccagccggactatgatagcgtggcatctgatgaggat
acagatcaagagctcccctcaagcaaaggagataggaccaagagcctggactctgacctc
tcagacagccccattactatgcaagagtacttggatgtgaagaccgcactctctgcctct
gaagccaagatccagcacctcatgaaagcgaacaacaacctgagtgacgagctgaggctg
atgcagaaaaagctgcaatctctgcaaagcgagaacacctctctcaggcggcaggtccca
accaatatctatcagatccccagcggttcagactaccctgacccctccagcccctcagcc
ttgaaacgccggcagtctgcgcgggccagtcggccaatgtctatgtatgagaccggttca
ggcctgaagccctatctccctaaaggagaaactccctacccagaggagggtatccccacc
ctgcaacccttcccatctcatacggaaaggggcgcttttgtgaccacctcttcatccctc
ccctcatttccatccaccctgtcttggtcgaaggacgaaagtactcaaaaggcctcgaag
ttagagaagcagagcagcatgccagaaagtgactatgacaatacattcaatgactctgag
atggatgattcaggtttatacaggagagggaggctgaggagcagtggctggctgggggag
ggcacttctatccctgagctggatgatctggagatggaatcagacccctcacttcccagc
actgaggacgtcattcgcaaaaccgagcagatcaccaagaatatccaagagcttctgcga
gctgctcaggacaacaaacatgacagcttcataccctgctcagaaagaatacatgtggct
gtgacagaaatggctgccctctttcccaataagccacgctcagagacggtgaggagctct
ctgcgcttgttgacctccagtgcttacaggcttcagggcgagtgcaggaaggcggtgcct
tcagagggctgcccaggaccggacatgcagctggtcacccagcaggtcatccaatgtgct
tatgacattgccaaggcagccaagcagcttgtaaccatcaccacaaaggagaataccaac
taa
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