Scomber scombrus (Atlantic mackerel): 133979245
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Entry
133979245 CDS
T10651
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133979245 (adamts13)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
133979245 (adamts13)
Peptidases and inhibitors [BR:
ssco01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
133979245 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
ADAMTS_CR_2
Reprolysin
TSP1_CCN
Reprolysin_3
TSP1_spondin
Reprolysin_5
Adt-1
Reprolysin_4
Reprolysin_2
CUB
Peptidase_M10
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
133979245
NCBI-ProteinID:
XP_062273716
LinkDB
All DBs
Position
4:complement(9339540..9349633)
Genome browser
AA seq
1396 aa
AA seq
DB search
MFFMTQLCLLLLRPGFAALMRSPLDEVGGKLRVNRSTVHFHHSYHQADIVSYQGSSPDAS
DSGRLRRSALLPDITHLELLVVVGPDVQQAHKQDTERYILTNLNIASELLRDMTLGANMR
VHLVRMIILSEPEPEIQMSTNITSCLRSVCDWGRRIIPSNDTDPLHADLLLYITRYDLVL
PDGNKQVRGVAQLGGACSSEWSCVITEDTGFDLGITIAHEIGHSFGINHDGVGNACSRSG
FMMASDGGYNSVDLTWSPCSRQQLLTFFSEGKAECVKDLPDLEGSLQDWKPGLYYGVDDQ
CRIAFGSTARACSFTNPDLPACRVLSCHINPDDDSSCKRLLVPLLDGTECAPNQWCLKGR
CVSPDKLTSSAVVHGSWSSWSDFSPCSRTCGGGVTYRTRKCTNPRPAFGGNDCEGPDIGA
ELCHQQPCENTQLDFMSEQCSQTDLQPLYLLPNTASFYTWIPALGFAQGDEQCRYTCQSD
RENFIVSRGSQFIDGTRCESDSPPPFGSTAACLRGKCQLFGCDGVLHSGKVRDMCGVCGG
DGSSCSLTSDSYTGGQAKEYTTFLTLPVNATQVHIVNRAPLFTHMAVMAGDRYIVSGMES
MALNMTHPSPLDDNRLEYRLHLTLDLLPEMEELLLPGPMQQEINIQVYRKYGKAYGEKTN
PNISYQFYVPTRNDMKDITHKGKWVVFTTPCSVSCGSGVQKHIQVCVDRDTNDHLEEHNC
DAFPPTVPLQTSCQLPLCPPRWVTGEFGPCSASCGGGERVRPVKCVQKHGADVVKVPDSE
CRPDSAPNAVEKCNLQLCPARWRVSEPGECSAVCGPGEAKRAVSCVRQEEGQDVEVDQSF
CSNQIRPPDSVPCVVDVCPIGWESKGENQPGPKSGLLPRSRQAPVYVWSPVISQCSKTCG
NGTLQVWFSCVDHQSRLGVPDFHCDASSKPAPHSETCSTSPCPPMWHSKLGVCSVTCGGG
VANRVLYCARETEGEEEVVEDIQCIDFPKPTAVVSCNTHSCPARWKVLSTSLCSVSCDLG
IAQRTMACVQFVHSRESVVPEETCHAAVKPATTVPCLVQICTYRWEVKPWSQCSVPCGYG
IQSRAVSCMGPSKTEPLSPVFCMHLPKALTIQGCNMGSCGHVPATSDPTERTEERAKLTE
EGPLLSPTTSHVGHLPRNPTEAITFPQITTTATPTPKPSACGKLLLEQSGTVDLRDVTGR
CTVSIGRPLDEVIHVKVESTSLDCRKKEYVAFFDRLAFVRRCEQVAGSELTTRTNVLLVR
QHLLTPGNGVVLTYNSQKNMKKSHHQDCDMQLFSTSGVFENPTTSNRNHTCRVLINAPPS
VKIRIQALHIGLVFNATNSQSTYIMIRDMDVLKTNVFKGHQLFQWHSSGNMAEIEFHGDY
LHSKGSFRAEYTFIRL
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgttttttatgactcagctctgtctgctgctgctgaggcctggcttcgctgctctaatg
agatctccattggacgaagtaggtggaaagctgcgggtgaacaggagcactgtgcatttt
catcactcctaccatcaagcagacatagtttcttatcagggttcttctcctgatgcctca
gatagtggtcgtctgcgtcggtcggctctgttgcctgatatcacccacctggaactgctg
gtggtggtggggcctgatgtccagcaggcccacaagcaggacacagagcgatacatcctc
accaacctcaacattgcctcagagctgttgagagacatgacgctgggcgccaacatgagg
gtgcacctggtccgcatgatcatcctgtcagagcctgagccagagatccaaatgtctacc
aacatcacctcttgtcttagaagtgtctgtgattggggaagaaggataatcccctcaaat
gatacagacccactacacgctgatcttctcttgtacattacaagatatgacctggttttg
cctgatgggaacaagcaggtcaggggagtagcacagctgggtggggcttgctccagtgaa
tggagctgtgtgatcacagaggacacagggtttgacctggggatcactattgcccatgaa
attggccacagtttcggaatcaaccatgatggagtaggaaacgcctgcagcaggagtggg
ttcatgatggcctctgatggaggctacaacagtgtggatctgacgtggtcgccatgcagc
agacagcagctgctcacattcttcagtgaagggaaagctgaatgtgtaaaagacctgcca
gacctggaaggctccctacaggactggaagcctggtttgtactatggagttgatgaccag
tgtcgaatagcttttggaagcactgcaagagcatgttcttttaccaatccagacttgcca
gcctgtcgtgttctgtcctgtcacattaaccctgatgatgacagctcctgtaaacgcctc
ctggttccactattggatgggacagagtgtgcaccaaatcaatggtgtttaaaggggcgc
tgtgtgtccccagacaagctcacctcctctgcggtggtgcatggctcgtggtctagctgg
tctgatttctccccctgctcacggacttgtggtgggggagtcacttaccgcacacgcaag
tgcaccaacccaagacctgcttttggagggaatgattgtgagggtccagatatcggagct
gaactttgtcaccagcaaccatgtgagaacacccagctggatttcatgtcagaacaatgt
tcccaaacagacctccaacctctctaccttttaccaaacactgcctccttctacacctgg
atccctgctttaggctttgcacaaggggatgagcagtgcagatacacgtgccagtcggac
agagaaaacttcatagtgagtcgcggctctcagtttattgatgggactcgctgtgagtca
gacagcccgcctccctttggctccacagctgcctgtctcagagggaaatgccagctgttt
ggctgtgatggtgtgctgcactcggggaaagtgagggatatgtgtggggtgtgtggtgga
gatggatcatcctgcagtttgacttcagactcctacactggtggtcaggccaaagagtac
accacctttctaactctaccagtgaatgccacacaggttcatattgtgaacagggcacca
ctgtttactcatatggctgtaatggccggggatcggtacattgtgtctggaatggaaagc
atggcactaaatatgacccacccatccccactggatgataatcggctagagtaccgtctc
cacttgacccttgaccttttgcctgagatggaagagctgcttctgcctggaccgatgcag
caggagataaatatacaggtttatcgtaaatatggaaaagcatatggagagaaaacaaat
ccaaacattagctaccagttctatgtgcctaccagaaacgacatgaaagacatcacacat
aaaggcaaatgggttgtcttcacaacaccctgctctgtctcatgtggatcgggtgtacag
aagcatatacaagtgtgtgtagacagagacaccaatgaccatttggaggaacataattgt
gatgcatttcccccaaccgtaccacttcaaacaagctgtcaactcccactctgtccccct
agatgggtcacaggcgagtttggaccctgcagtgcctcctgtggtggaggagagagggtg
cgtcctgtaaaatgtgttcagaaacacggagccgatgttgtgaaggttccagattctgaa
tgtcggcctgattcggctccaaatgctgttgaaaaatgtaatcttcaactctgtccagcc
agatggcgtgtgtcagagccaggggaatgttcagcagtatgcgggccaggagaggcaaaa
cgcgctgtgtcatgtgtccggcaagaggaaggtcaggatgttgaagtggatcaaagcttc
tgttcaaatcaaataagaccacctgattctgtgccctgtgtggtagatgtttgtcccatc
ggatgggagtcaaagggagagaaccagcctggtccaaagtctggtttgttgccacgctct
agacaagctcctgtgtatgtctggagtcccgttatcagccagtgctcaaagacctgtggt
aatggaaccctgcaggtgtggttttcctgtgtggaccaccagtccagacttggggtgcct
gacttccactgcgatgcttctagcaaacctgctcctcattctgagacctgcagcacatcc
ccctgtcctcccatgtggcactctaagctaggagtctgcagtgtaacatgcggaggaggg
gttgccaacagggtgctgtactgtgctagagagacagaaggggaggaggaggtggtggag
gatatacagtgcattgactttcccaaacccacagcagtggtgtcctgtaacacccacagc
tgcccagccaggtggaaggtcctgagcacatccctctgctctgtctcttgtgacttgggt
atagctcagaggactatggcctgtgtccagttcgtccacagcagggagagtgtggtgccg
gaggaaacctgccatgcagctgtcaaaccggccaccacagtgccttgcctggtgcagatc
tgcacctacagatgggaggtgaagccgtggagccagtgctcagtgccctgtggatatggg
atccagtccagagctgtgtcctgcatgggcccctcgaagactgaacccctcagccctgtg
ttttgtatgcacttgcccaaggcccttaccatccagggttgtaacatgggtagctgtgga
cacgtgcccgctacctcagaccctactgaacgtactgaagaaagggctaaactcacagaa
gagggacctctcctgtctcccaccacaagccacgtgggccatcttcctcgaaatccaaca
gaggcaatcacattcccacaaatcacaacaacagccaccccaacacctaaacccagtgct
tgtgggaagctactcctggaacaatcaggcacagtagacttgagagacgtaactggccgc
tgcacagtatccataggtcgacccttggatgaggtcattcacgtcaaagtagagtccacc
tctttggactgcagaaagaaggagtatgtagcattttttgaccgtctggcgtttgtgagg
aggtgcgagcaggtagcaggtagtgagctgaccaccagaactaatgtcctgctcgtacgt
cagcatctgctcacgcctgggaacggggttgtgctcacctacaactctcaaaaaaacatg
aagaagagtcaccatcaagattgtgacatgcagctgttttccaccagtggtgtcttcgag
aatccgacaacgtccaacagaaaccacacctgtcgagtcctcatcaacgcccctccttca
gtgaagatcagaatccaggctctgcacataggattagtgttcaatgccaccaactcccag
tctacatacattatgatccgggacatggatgtcctgaagaccaacgtgtttaaaggccat
cagctgtttcagtggcactcctccggaaatatggcagagattgaatttcatggagattac
ctgcattccaaagggagcttcagagctgaatatacctttatacgtctttaa
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