Scomber scombrus (Atlantic mackerel): 133979280
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Entry
133979280 CDS
T10651
Symbol
arid5a
Name
(RefSeq) AT-rich interactive domain-containing protein 5A
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133979280 (arid5a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
ARID
133979280 (arid5a)
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Gene cluster
GFIT
Motif
Pfam:
ARID
CREG_beta-barrel
Motif
Other DBs
NCBI-GeneID:
133979280
NCBI-ProteinID:
XP_062273768
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Position
4:11246515..11254351
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AA seq
600 aa
AA seq
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MAQEEQRETSQQTAASEEEKGTSNQTSPLVIEIHDSTTECEEEVRPNQLQMEEKSFVSNL
HSFMKGRGTPIERIPHLGFKQINLWMIYKAVEKLGGYDSVTARRLWKKVYDELGGSPGST
SAATCTRRHYERLVLPFERHIKGEEDKPLPPSKPRKPYKRNLDGKVNKAEGKRKRTQSDR
EIDSELLTQRSPEAACQSEAGMHPHSALWPATSDRHHLDCSQPSRAAPDLCSPVFACSHR
LQVPATSPWTAHIPSAAGEVISPLEKKKRMAQASLSLPLSPQGEDKERPSVIHCSQSPAW
ASSSRNCNSSDGSPLPLSSSSSRSPSPYSVSSEDSPAGNEDKPASSSELSINYSNTVKNT
SSSSEDSKSLSCSQTSKDPAGQNKDVSQVSSTDSLKGQIKDSALKLIHKGSAKNFTQAFH
SSFTVKSDWAPTSTSSFSKVIPKSVQLLRPAPIRPGYKIHQSRLTQQSDSLNCAKKMNNM
APWLYPTEKREKSRTMQQKVPLTQQSLSHSPATMPASCVLSSYDRSGRDSRHQPSLYPAF
LPNRMRLPQSQLMYRHVPVSPAHTALIGSAVYPYPYSFPIFSPQTGYTLPAMNPIYPHKL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaggagcagagagagacgtcacaacaaaccgcagccagtgaagaagagaaa
gggacatcaaaccagacttctcctttagtgattgagattcatgactctacaactgaatgt
gaggaagaagtgagacccaatcaactgcagatggaggagaagtcatttgtgtcaaatctg
cactcttttatgaagggcagaggtacacctatagaaaggattccacatctgggcttcaaa
cagattaatctttggatgatttacaaagccgttgagaaactgggtggttatgattcagtt
acagcgcgacgtctttggaagaaagtgtatgacgagctgggaggaagtccaggcagcacc
agtgctgctacctgcactcgaagacactatgagaggttggtgctgccctttgagagacac
ataaaaggagaagaggacaaacctttgcctccaagcaaaccacggaagccatataagaga
aatttggatggcaaggtcaacaaggctgaggggaagaggaaaaggactcagtcggataga
gagattgattctgagttactcacacagaggagtccagaggctgcctgccaaagtgaagca
gggatgcaccctcactccgctctctggccggccacctctgacagacaccatctggactgc
tctcagccaagtcgagcggcccccgatctttgctctcctgtctttgcatgttcccaccgt
ctccaggtccctgcaacaagcccctggactgctcatatcccctcagcagctggagaggtc
atttctcctctggagaaaaaaaagcgaatggctcaggccagcctcagcttgcccctgagc
ccacagggtgaggataaagaaaggccctctgtcatccactgctctcagtctccagcttgg
gcttcctccagccggaactgcaactcctctgatggctccccgttgcccttatcctcctct
tcttcccgcagcccttccccttactctgtttcatcagaggacagtccagcaggtaatgaa
gataaacctgcatcaagctcagaattgtcaataaactattccaacactgtgaaaaacaca
tctagctctagtgaggacagcaagtctctgagctgcagtcagacatctaaagatcctgca
ggacagaacaaagacgtttctcaagtcagctccacagattcacttaaaggccagattaaa
gactctgccttgaagttaatccacaaagggagtgccaaaaacttcactcaggcttttcac
tcatctttcaccgttaagtctgactgggccccaacgtctacctctagtttctccaaagtt
attccaaaatctgtacaacttctgcgccctgctcctattcggccaggttataaaatccac
cagagtaggttgacgcagcagagcgactctctgaattgtgcaaagaagatgaacaacatg
gctccgtggctttatccaacagagaagagggagaaatccaggacaatgcaacaaaaagtt
cccctgactcagcagagtctgtcccattccccggccactatgccagcgtcgtgcgtcctg
tcgagctacgacagatcagggagggactctcggcatcaaccctcactgtaccccgcattt
ctccccaacagaatgaggctacctcagtctcagctaatgtatcgtcacgtcccagtgagt
ccagctcacactgctctcattggctcagctgtttacccatatccctactcctttcctatc
tttagtccccaaactggatataccttacctgccatgaatcccatttaccctcacaagctg
tga
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