Scomber scombrus (Atlantic mackerel): 133979317
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Entry
133979317 CDS
T10651
Name
(RefSeq) protein crumbs homolog 1-like
KO
K16681
protein crumbs
Organism
ssco Scomber scombrus (Atlantic mackerel)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
Laminin_G_2
Laminin_G_1
EGF_CA
EGF_2
Laminin_G_3
cEGF
EGF_Teneurin
EGF_PEAR1L
JAG1-like_EGF2
Syndecan
Motif
Other DBs
NCBI-GeneID:
133979317
NCBI-ProteinID:
XP_062273815
LinkDB
All DBs
Position
4:complement(4588344..4613287)
Genome browser
AA seq
1461 aa
AA seq
DB search
MEFGRVWSRYQRMVLITMMMFKLGLLCTVAADNCLSSPCNNGATCLDHLSDYVCLCPKGP
VWYMGKNCDELYDACIMSPCTNCTSTLGTDEFTCHCLDGFTGLNCTQDVDECQSNPCIGV
RSYCVNGVNGYSCHCPFGLGGEDCQDNITTCSDETCQNGGTCMDIPDTGHRCQCAAGYQG
MNCEENIDECQSEPCMNGAICKDGVNAYQCFCVPGFQGYHCDLDINECASRPCQNNGTCL
DEVDHYRCDCAPGFKGINCEIEIDECELHPCQNGATCRDHVAMYTCECMPGFQGQDCEVN
IDECASMPCLNGGKCIDGVNSYECDCDETGFVGDHCEEDIPECASDPCQHGATCLEGFNQ
YSCLCWPGYEGENCQVDIDECEQLPCEYDGECFQRSDDLNYGVLPELDTANFTYEEAAGF
ICRCLPGFTGDNCSVNVDECESAPCQHGGSCKDLVNSYQCLCPAGFTGVHCEVDINECDS
NPCENGATCEDAVNSYRCECPEPEPGQEPWGGRNCDIRLVGCQEHQCQHEADCVPMLTDN
GEHSYTCLCPPGWTGERCNTSTTFSFNSEGYVHMLLPVSKNRTRRETANHGLDMQLRFKS
TLTDMVLYHRGTMTRFVSLELVGGSLQARVKSGKMLQVVYPGPVNDGEWRQVTVIMDERL
VLIVKGPGCEEGCQVKNEGHNHLIFLQPSSFQDIYVGGAPPEYLAHSSSRKGFIGCMEDL
QVDHKLLLPQDLIREENKGLELGCTKKDWCRDDPCKQRGQCIDKWVKASCQCDRPYYGES
CEKEYLSWTFGHENTTSYAAFNISETHGENFTISFIMRSLKHNGLLLQLCQEDKPYLTIY
LKEGTVAIYSPHTTLLSEAKLVTDGNNNLVTVQVHYGHVVFPKAGNKRALGNVSVEAGDV
AYVGGLPEGKDMNAWGGNFKGCLQDIRLDNKHLSTVDHTEGVEMYQTSAEENVLPGCQSD
DTCKDEPCLNGGQCQITWNDFKCDCSVNYSGRLCETRLWCVDNPCFDGVKCVDLKDGYEC
LTEAIFQDNALQYAANSSLLSPVTDVTMDIRTRDEDGTLLRASSKAEVFCIGLLNSTLLV
KLDSGASTELLAFTSDRIIADGAWHHIRLSMVDPTKSVSRWRLTVDGQRAGGSYGVGGNL
NFLNDTKIWLAEKYTGCLGEMRVGGVYLPLVNVPDAPQTSRFSRLGGHEPIVGCQGAPIC
DSQPCLNQGVCQDQFNEFNCSCSPGWEGGLCETEINECSSGPCVHGTCKDLLADYQCECE
PGYAGKDCQDEVDDCLEFRCVNGGTCMETMGTHTCSCPPGYIGKRCQWRFPPVACYSNTD
CLNGGICIGGNSGGNCTCKPGYIGARCETEIDECESGPCLNGATCLDRLNHFQCVCVLGF
SGTLCDSNKEQYKERVPWLAVTIPLTTLCMLVAILVVFFLIITARKKRQSEGTYSPSSQE
VAGARLEMGSVLKVPPEERLI
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggagtttggaagagtttggtccagatatcagaggatggtgctgatcaccatgatgatg
ttcaaactgggcctactgtgcacggtggcagcagacaattgtctctcgtctccctgcaac
aatggtgccacatgtctcgaccacctgagtgactatgtgtgcctgtgccctaaaggaccg
gtgtggtacatgggtaaaaactgtgatgaactgtatgatgcctgcatcatgtcaccttgc
acaaactgtaccagcacacttggtactgatgagttcacctgccactgcctggatggcttc
acaggcctcaactgcacccaggatgtagatgaatgtcagagcaacccttgcataggtgtc
cggtcctactgtgtcaacggagtcaatggctattcatgccactgtccatttggattagga
ggggaagactgccaggataacatcaccacttgctcagatgaaacatgccagaatggtggc
acctgtatggacatacctgacactggtcaccggtgccagtgtgctgctgggtaccagggg
atgaactgtgaggagaacatagatgaatgtcagtctgaaccttgtatgaatggagccatc
tgtaaagacggggtcaatgcctaccagtgcttctgtgtgcctggatttcaaggctaccac
tgtgacttggacatcaacgagtgcgcctcccgaccctgtcaaaacaatggtacatgtctg
gatgaggtggatcactacaggtgtgactgtgctccaggcttcaaagggattaactgcgag
atagagatagatgagtgcgagctgcatccctgccagaacggcgctacctgccgagaccac
gtcgccatgtacacgtgtgagtgcatgcccggtttccagggccaggactgcgaggtcaac
attgatgaatgtgccagcatgccgtgtctgaatgggggcaagtgtatcgacggggtcaac
agctacgagtgtgactgtgacgagacgggctttgtaggtgaccactgtgaagaggatatt
cctgaatgtgcttctgacccctgccaacatggagccacatgcttggagggcttcaaccag
tacagttgtctctgctggccaggttacgagggagagaactgccaggtggatatagatgag
tgtgagcagcttccctgtgaatacgatggcgagtgtttccagcgctcagatgacctgaac
tacggggtgctgcctgaactcgacacagctaatttcacctatgaagaggcggctggtttc
atctgccgctgtctgccaggctttaccggggacaactgctcagtcaatgtggatgaatgt
gagtctgctccatgtcaacatggaggaagctgcaaggatctggtcaactcttatcaatgt
ttgtgtccagctggcttcacaggcgttcactgtgaggtggacatcaacgagtgtgacagc
aatccctgcgagaatggcgccacgtgtgaagacgctgtcaactcctataggtgtgagtgt
cctgagccagaacctgggcaggagccgtggggtgggcgcaactgtgatatccgcctggtg
ggctgccaagaacaccaatgtcaacatgaagcagattgtgttcccatgctgaccgacaat
ggtgagcacagctacacctgcctatgtcctcccggctggaccggagaacgctgcaacacc
tcaaccactttttctttcaattctgagggctacgtccacatgctgctgcctgtttccaaa
aacaggacgaggcgagagactgccaaccatggtctagacatgcagctacgattcaagagc
actctgactgacatggtgctgtaccaccggggcaccatgacacgtttcgtctccctggag
ttagtcgggggctccctccaggccagggtgaagtcaggaaagatgctgcaggtcgtttat
cctggcccagtcaatgatggggaatggcgccaagtcactgtgatcatggatgagaggctg
gttctgattgtaaagggacctggttgtgaggaagggtgccaggtgaagaatgagggtcac
aatcatctcattttccttcagcccagctcctttcaagatatctatgtaggaggggcacca
ccagaatatttggcccattcatccagtaggaaggggtttattggctgtatggaagacctt
caagttgaccataaactgctactgcctcaggacctcatcagagaggagaacaagggcttg
gaactgggatgcaccaaaaaagactggtgccgtgatgacccatgcaagcaacgtgggcag
tgtatcgacaagtgggttaaggccagttgtcagtgtgaccggccctactatggagaaagc
tgtgagaaagaatacctgtcctggacctttggtcatgagaacaccaccagctatgccgcc
ttcaacatctcagaaacccacggagaaaacttcaccatctcctttataatgcgctccctc
aaacacaatggtctgctcctgcagctctgtcaagaagacaagccttacttgacaatctac
ctgaaggaaggcacagttgctatctacagccctcacaccacactgctgtcagaggccaag
ctcgtcacagatggtaacaacaacttggtgactgtacaggtgcactatggccatgtggtc
ttccccaaagcaggaaacaaacgtgccttagggaacgtgagtgtcgaggcaggggatgtg
gcgtatgtcggaggactccctgaaggcaaggacatgaacgcctggggtggaaatttcaag
ggctgcctgcaagacattcgactggacaacaaacatctgtccactgtggatcacacagag
ggggtggagatgtaccagacaagtgcagaggagaatgtgctgccaggatgccaaagtgat
gacacatgcaaggatgagccctgtctcaacggtggacagtgtcagattacctggaatgac
ttcaagtgtgactgctccgttaactactcgggccgactgtgcgagacacgtttgtggtgt
gtcgacaacccttgtttcgatggagtgaagtgtgtggacctaaaagacggttatgagtgt
ttaaccgaagccatctttcaagacaacgctctccagtatgctgccaacagctccctgctg
agccctgtaactgatgttactatggacataagaacacgggatgaggacgggaccttgttg
cgggcctccagcaaagctgaagtattctgcattggcttgctcaactccacccttctggtc
aaactggacagcggggcaagtacagagctgctggctttcacaagtgacaggatcatcgca
gacggagcgtggcaccacatccggctgagcatggttgatcccaccaagtcagtgtcccga
tggcgcctcacagtggatgggcagagagcaggaggcagctacggcgttggtggaaatctc
aacttcctcaatgataccaaaatctggctggctgagaaatacactggatgtttaggggag
atgagagtgggtggagtctacctgccacttgtaaatgtaccagacgcccctcagacgagc
cgcttctccagactgggtgggcatgaaccgatagtaggatgccagggcgcccctatttgt
gattctcaaccgtgcctcaaccagggtgtgtgtcaagatcagtttaatgagtttaactgc
agctgcagcccaggatgggaaggagggctgtgtgagacagagataaatgagtgttcttca
ggcccctgtgtccatggcacatgtaaggacctcctggcagactaccaatgcgaatgcgag
cctgggtacgcggggaaagactgtcaggatgaggttgacgactgtctggagttcagatgc
gtgaacgggggaacctgcatggaaacaatgggaactcacacgtgttcatgtcctcctgga
tacattggcaagcgctgccagtggcgtttccctccagtggcttgttattcgaacacagac
tgtcttaatggagggatttgtataggaggcaactctggaggcaactgcacctgtaaacca
ggatacataggagccaggtgtgagacagaaatagacgaatgcgagtccggcccctgtctc
aacggtgccacctgtctggacagactcaaccacttccagtgcgtctgtgtgctgggcttc
agcggcacactgtgtgacagcaacaaagagcagtataaggagcgagtcccctggctggcg
gtgaccatcccgctgaccactctgtgtatgttagtggccatcctggtagtgtttttccta
atcatcacagcccggaagaagcgtcagtcagagggcacctacagccccagctcacaggag
gtggccggtgccagactggagatgggcagtgtcctcaaagttcccccggaagagaggctg
atatga
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