| Entry |
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| Symbol |
msh3
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| Name |
(RefSeq) DNA mismatch repair protein Msh3
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| KO |
| K08736 | DNA mismatch repair protein MSH3 |
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| Organism |
ssco Scomber scombrus (Atlantic mackerel)
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| Pathway |
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| Brite |
DNA repair and recombination proteins [BR:ssco03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
133979368 (msh3)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:complement(22243598..22286158)
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| AA seq |
1092 aa
MPKSVKKSCSAQTSISRYFNTPNPAEHQLPRGKQKVSSQDDCGLPAKRAKLSPQGQKVKE
DLDCEITSCQSTKETKRPLSRGAGGVCSSTLKKLRGFTCTTEPSDTEREVKETAGASSKI
CNQGSSGWRPHDVTDQHSNNNRLQQAEVEDGDEEEVKERGKPKQGACFSQFVKPGRRAAE
LSPPSDSSAPSRNSKTVYTPLEQQVIQLKQQHKDALLAVECGYKYRFFGEDAEIAAKELN
IICHLDHNFMTCSIPTHRLFVHVRRLVSQGHKVGVVKQTETSAIKASGATKNALFGRQLS
ALYTKSTLVGEDVNPVCKLGDVEEGDCGDVMSDPPESFLLCISESWDKLKKQLTVGLVAV
QPSTGDVLFDCFPDSQSRSELEGRVLKINPVEILVPSDLSEQTLRLLQSITNASAQEDDS
VRIEKRDNTQFEFASAMNTVTEFYCRTQDKGSRSLSSVASLESPVICCLGPLIQYLQEFN
LERVLRSESSFRHLNCDSEAMILSAATLRNLEILNNQTDGGVKGSLLWVLDHTCTPFGRR
LMRKWVSQPLKDPQSISDRQDVVQEILESDFLTLNSLRSLLSHLPDLERGICSIYHKKSS
TQEFYLISSSLSRLGLELQALLPAIQAQIRSTLLQGLLLDTPGLLAPAHSFLKVLNEKAA
KSGNKTELFSDLSGFPVLRERREKIQNVLNEIQDHRRDIRLVLKAPSLDYTTVSGQEFLI
EVKNSQSSTVPRDWIKISSTKVVGRYHSPFLVEHYKKLQQLREQLLLDCQREWTNFLDQF
GEHYHTMKRAISHLATMDCLFSLAEVAKQGDYCRPKVCESQRQIMIRDGRHPAIDILKGE
HNQYVPNHTELKGDGRRTMIITGPNMGGKSSYIRQVALICVMAQMGSYVPALEAHLGILD
GIYTRMGASDNIYKGRSTFMEELTEASAIIFRATERSLVILDELGRGTSTHDGIAIAYAT
LEYFIRDVKSFTLFVTHYPSLCELEQVYPEHVSNYHMAFLLNEPDITTDTEEVQPEFITF
LYQLTEGAAGRSYGLNVARLADIPDPILHTAALKSRELENMVNSRRKNKKILSDIWSISD
RSSLMKWLQSNS |
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| NT seq |
3279 nt +upstreamnt +downstreamnt
atgccaaagtctgtgaagaagtcctgcagtgctcagacctccatcagcaggtacttcaac
accccaaaccctgcagagcaccagcttccaagaggcaagcaaaaagtttcctctcaggat
gattgtggattaccagcaaaacgagccaagctttccccccaaggccagaaagtgaaggag
gatctggactgtgagataacatcctgtcagagcactaaagagacaaagcgaccattgagc
agaggagcaggtggcgtctgctcctccaccttgaagaagttgagaggcttcacctgcacg
actgagcccagtgacactgagagggaggtgaaagagacggcaggtgccagcagtaaaatc
tgtaaccagggaagcagtggctggcgtcctcatgacgttacagatcaacacagcaacaac
aacagactccagcaggcagaagtggaggatggggatgaggaggaggtcaaagaaaggggg
aaaccaaaacagggggcgtgcttctctcaatttgtcaagccaggaagaagagctgcagag
ctgagtcctccatcagactctagtgccccctccagaaattcaaagactgtgtacactcct
ctggagcagcaggtcatccagctgaaacagcagcataaggatgccttgctggctgtggag
tgtggttacaagtacaggttctttggagaggatgcagagattgcagcgaaggagctgaat
atcatctgtcatctggatcataacttcatgacctgcagcatccccacacaccgtttgttt
gttcacgtcaggcggctggtgtctcagggacacaaggtgggtgtggttaagcagacggag
acatctgcgatcaaagcttcaggggccactaagaacgctctgtttggtcgtcagctcagc
gctctatacacaaagtccactctggtgggagaggacgtaaacccagtctgtaaactgggg
gatgtggaggagggtgactgtggtgatgtgatgtcagaccctcctgagagcttcctgctg
tgtatcagtgagagctgggacaagttgaagaagcagctgactgtagggctggtggcagtt
cagcccagcacaggagacgtgttgttcgactgtttccctgatagtcagtctcgctctgag
ctggaaggtcgtgtcctgaagatcaaccctgtggagatcctggtgccctccgacctctca
gaacaaaccctcagactcctgcaaagcatcaccaatgccagcgctcaggaagatgacagt
gtgcgaattgagaagagggacaacactcagtttgagttcgcctctgctatgaacacagtc
acagagttctactgccgcacacaggacaaaggctctcgctctctgtcgagtgtagcatcc
ttggagagcccagtgatttgctgtctggggcctctcatccagtacctccaagaattcaac
ttagagagagttcttaggagtgaaagctcatttcgacatctgaactgtgattcggaggct
atgatccttagtgctgccaccctcaggaacctggaaatcctcaacaatcagacagatggt
ggtgtgaagggcagtttgttgtgggtgttggatcatacttgcactccatttgggaggaga
ctgatgaggaagtgggtgagccagcctctaaaagacccacagtctatctctgacaggcag
gatgtggtgcaggagatccttgagtcagactttctcactttaaactcgctcagatccctg
ctgtcacatttgcctgacctggagagaggcatctgtagcatataccacaaaaagtcttcc
acacaggagttttacctcattagtagcagtctttctcgtctggggcttgaactgcaggcc
ctgctgccagccatccaagcacagatcaggtcaacgctgcttcaagggcttttgttagac
actcctgggctcctggctccagcccatagcttcctcaaggtgctcaatgaaaaggcggcc
aagtctggcaataagacagagctgttctcagacctgtccggcttccccgtgctgcgggaa
aggagggagaaaatccagaatgtgctcaatgaaatccaagaccaccgcagagacatcagg
ctggtgctgaaggccccctcacttgactacacgaccgtgtctggacaggagtttctgatt
gaggtgaagaactcgcagtcttccactgttccacgtgactggatcaaaatcagcagtact
aaggtggttggcaggtatcactctccatttctggtggagcactacaagaagctgcagcag
ctccgggagcagctgctgctggactgccagagagagtggaccaattttctggatcagttt
ggggagcactatcacaccatgaaaagggctattagtcacctagcaaccatggactgtctc
ttttcattggctgaggtggctaaacaaggggactattgcaggccaaaggtgtgtgaaagt
cagcgtcagattatgatcagggatggtagacatcctgccatagacatattgaagggagag
cacaaccagtatgtgcccaaccatacagaactaaagggtgatggcaggagaactatgata
attactggtcctaatatgggaggtaagagctcctacattcgccaggtggccctgatctgt
gttatggcccagatgggctcctacgtcccggcccttgaggcccatctgggcattctggac
ggcatttacaccaggatgggggcgtcagacaacatctacaaaggacgtagtacgtttatg
gaagagctgacggaggcctcagccatcattttccgtgcaaccgagcgctcattggtcatc
ctggatgaactggggcgaggcacaagcacccatgacgggatcgccatcgcttatgccacc
cttgagtacttcatcagagatgtgaagtccttcaccctgtttgtgacccattacccttct
ctgtgtgagttggagcaggtgtatcctgaacatgtgtccaactaccacatggctttccta
ctcaatgaacctgatatcactactgacactgaggaggttcagccagagttcatcaccttc
ctctaccagttaactgaaggagctgcagggcggagctacggcctgaatgttgcccgattg
gctgacatccccgatcctatactacacactgctgcactgaagtccagagagctcgagaac
atggtcaactccaggaggaagaataagaaaatactgtcagatatttggagcatctccgac
agatcgtccctcatgaagtggctgcagtcaaactcctaa |
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